Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00805 atggatCCAGTGGCCGCACAAGGTCGTCCTCTTCCACCTCCCTTTCTCAGTAGAGATCTTCATTTACACCCTCACCACCAATTCCAATCCCATCACAACAACTTGAACTCAGAAGATGAGCAGCAGAGTGGTAATGGCAGCTTAAACCGCGGCCAGAAACGAGATCGAGACGATCATCAAAACACCACCAACAACAGCGCCAGCGCCGCCGCGGACGGCAAAGAATTAGGCTCTAGCTCCAACAACACAGAAGGAGGTGAGATCGGTAGAAGACCTCGAGGTAGACCAGCTGGGTCAAAGAACAAGCCAAAGCCACCCATCATCATCACTAGGGACAGTGCCAATGCCCTCCGATCCCATGTCATGGAAATCGCCAACGGCTGTGATATCATGGAGAGCGTCTCCACCTTCGCACGGCGGAGGCAACGTGGGGTTTGCATTTTGAGCGGGACCGGCACCGTTACCAATGTCACTCTACGGCAGCCAGCGTCACCAGGTGCAGTTGTCACCTTACATGGAAGATTCGAGATTCTCTCCTTGTCAGGCTCCTTTCTGCCGCCACCGGCGCCGCCTGCGGCTTCGGGATTGGCGATATATTTGGCGGGTGGTCAAGGTCAGGTGGTTGGCGGCAGCGTGGTGGGCCCCTTGTTGGCGTCGGGTCCGGTGGTAATTATGGCGGCTTCTTTTGGTAATGCGGCGTACGAGAGGCTGCCCTTGGACGAGGAGGAGACACCGGCGGCGGCACCGGGGAGCGGAGGGTTAGGATCACCGGGGATTGTAGGTGgacaacagcagcagcagcagcagcaacaacaacTAATGCCAGATCCTAACAGTTCACTACTCCATGGAGTGCCTCAAAATCTTCTGAATCCATGCCAATTACCAGCTGAGGGTTACTGGGGTGGAAGTGCTCGCCCTCCTTTTTA 929 0.5361 MDPVAAQGRPLPPPFLSRDLHLHPHHQFQSHHNNLNSEDEQQSGNGSLNRGQKRDRDDHQNTTNNSASAAADGKELGSSSNNTEGGEIGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLDEEETPAAAPGSGGLGSPGIVGGQQQQQQQQQQLMPDPNSSLLHGVPQNLLNPCQLPAEGYWGGSARPPF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00805 309 MobiDBLite consensus disorder prediction 258 287 - -
Bva01g00805 309 PIRSF ESCAROLA 19 308 IPR014476 GO:0003680
Bva01g00805 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 230 IPR005175 -
Bva01g00805 309 MobiDBLite consensus disorder prediction 1 20 - -
Bva01g00805 309 MobiDBLite consensus disorder prediction 25 108 - -
Bva01g00805 309 ProSiteProfiles PPC domain profile profile. 114 250 IPR005175 -
Bva01g00805 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 309 IPR014476 GO:0003680
Bva01g00805 309 CDD DUF296 118 185 IPR005175 -
Bva01g00805 309 MobiDBLite consensus disorder prediction 242 287 - -
Bva01g00805 309 MobiDBLite consensus disorder prediction 29 49 - -
Bva01g00805 309 MobiDBLite consensus disorder prediction 62 86 - -
Bva01g00805 309 Gene3D - 117 246 - -
Bva01g00805 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 247 - -
Bva01g00805 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00805 Bva-Chr1 5730133 5731606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00805 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 64.134 2.00e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00805 - - jre:108980480 413.305