Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00802 ATGAGTGTAAACTCTTGCAGCAGTGGAGGTGGTGGTGGCGGCGGTGGAAGCAGTAGTGGAGGACCTGGTGGGAGTGGCGGTGGCGGTCCATGTGGCGCGTGCAAGTTTTTAAGGAGGAAATGCGTGCCAGGATGTATTTTCTCGCCGTACTTTGATTCCGAGCAAGGAGCGACACACTTTGCGGCGGTGCACAAGATTTTCGGAGCAAGCAACGTGTCCAAGCTGCTCCTAAGCATTCCGGTGCACAGAAGACTTGACGCGGTGGTCACCATTTGTTACGAGGCACAAGCACGGTTAAGAGATCCCGTGTACGGCTGTGTCGCCCACATCTTTGCTCTTCAGCAAcagacttgtgTGTTCTTCACAGGTGGTGAGTTTACAAGCAGAACTCTCCTATTTACAAGGCCATCTTGCCACATTAGAACTACCCCAACCACCACAGCAACCTCCTCCACCGCAGGCGGCAATGGCACCACCGGCACTCTCAATCTCCGACCTCCCATCGGCCTCTGCCTCCGCCTCCGCCCCCTCCGGTCCGGTCACATATGATTCGTCTTCATTCTTTGATCCCATGGCCCAAACTTCATGGCCCACTCAGCCGCGGTCCATGGACCCGCGTCACTATTTAGCCAGCGGTCCATCATCGACGGTCAGCGCTAGTGATCTTCAAGCATTGGCCCACGAGCTCCTCCAGAGACACGGGTCTCCACCCACAGCTGGTGTGCCAAGTTCTAATGTATCCTCGTCTTCATCACTCTCTAAATGATCATGCATATTGCTGC 782 0.5448 MSVNSCSSGGGGGGGGSSSGGPGGSGGGGPCGACKFLRRKCVPGCIFSPYFDSEQGATHFAAVHKIFGASNVSKLLLSIPVHRRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQTCVFFTGGEFTSRTLLFTRPSCHIRTTPTTTATSSTAGGNGTTGTLNLRPPIGLCLRLRPLRSGHIFVFILSHGPNFMAHSAAVHGPASLFSQRSIIDGQRSSSIGPRAPPETRVSTHSWCAKFCILVFITLMIMHIA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00802 254 MobiDBLite consensus disorder prediction 1 22 - -
Bva01g00802 254 Pfam Lateral organ boundaries (LOB) domain 30 118 IPR004883 -
Bva01g00802 254 ProSiteProfiles LOB domain profile. 29 131 IPR004883 -
Bva01g00802 254 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 117 - -
Bva01g00802 254 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00802 Bva-Chr1 5699714 5702660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00802 32 117 AS2 family AT2G45420 88.372 1.60e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva01g00802 LOB 1.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00802 K21994 - psom:113306575 187.578