Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00801 aTGGATTGTGGTGGTAAGATTGGTGGAAGTGATAGAGGTGGGCCTTGTGGTGCCTGCAAGTTCCTGAGGAGAAAGTGTGTGAAGGGCTGCATATTTGCACCATATTTTGACTCAGAACAAGGCACGGCTCATTTTGCTGCTGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAACTTCTCTTGAGAATCCCAGCTCACAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAGGCTTTGGCTAGGGCAAGAGACCCTGTCCATGGCTGTGTTGGCCACATCTTTGCTCTTCAACAGCAGGTAGTGAACTTGCAGGCAGAGTTGGCTCATGTTCAAGCTCGTCTTTCAACATTACAACACTTCCCTTTTGCTCCTCCACCGTTTGTACAAGCTCATTGCTCTCCTTCACCAACGAGTTTGCATTCATCTTCGGAGTTGGCATCAACCGCTGATGCTGAGATGCAAACCAGCTCCAACCCATCCCTGCACTACGATCCTACTCTTCAATTGCATCCAGTATCACCAGAACTAAGCAGCTTCTTCAACATTCCATTGGATCAACAGCTTGACGATGGTGATCTCCACGCTTTGGCTCAAGAATTCGTGTCTAGGTATTTGCCCGGAGTAAGATTCCGGCCATCTGACTG 650 0.4846 MDCGGKIGGSDRGGPCGACKFLRRKCVKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARARDPVHGCVGHIFALQQQVVNLQAELAHVQARLSTLQHFPFAPPPFVQAHCSPSPTSLHSSSELASTADAEMQTSSNPSLHYDPTLQLHPVSPELSSFFNIPLDQQLDDGDLHALAQEFVSRYLPGVRFRPSD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00801 216 Coils Coil 95 115 - -
Bva01g00801 216 MobiDBLite consensus disorder prediction 135 169 - -
Bva01g00801 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 208 - -
Bva01g00801 216 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Bva01g00801 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 10 208 - -
Bva01g00801 216 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Bva01g00801 216 MobiDBLite consensus disorder prediction 135 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00801 Bva-Chr1 5688977 5692303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00801 13 215 AS2 family AT4G00210 55.963 4.34e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva01g00801 LOB 3.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00801 - - gmx:100791377 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00801 01 5688977 5692303 Bva02g01742 02 19732477 19736285 BWGD