Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00798 ATGGAAGCGAGAGAAGGCATTAGTTCTGGGGTTACAGTGATAGGAGCTGAAGCTCCATCTGCCTATCACGTGGCACCAAGGAGTGAAACTCCGACGCAGAGTCATGTTCCTGAGGCGGCAGCAGCAGGTGTAGCTGCTGTTGGTGCCTCACCAGTGAGTGTGGGAATTGATGGATCTTCCGTTAAGAAGAAACGAGGAAGGCCAAGGAAGTATGGGCCAGATGGGTCAGTAACTATGGCTTTATCGCCATTGCCGATTTCATCTTCGGTTCCACCTTCTAATGACTTTTCAAGTGGGAAACGGGGAAAAACTAAGGGGATGGAGTACAAGCAGCATAAAAGACTTGGGATGGAGAATCTAGGTGACTTGAATGCATCTTCTGTTGGTACAAACTTTATGCCTCATATAATCAATGTGAATGCTGGTGAGGACATCACAATGAAGGTTATATCATTTTCTCAACAAGGACCTCGTGCTATATGCATTCTATCTGCAAATGGTGTAATTTCGAATGTTACACTTCGTCAGCCTGATTCGTCTGGGGGCACTTTGACTTATGAGgGCCGTTTTGAGATACTTTCCTTGTCTGGATCTTTCATGCCTACTGAAAACCAAGGAGCAAGAAGCAGGTCAGGTGGGATGAGTGTCTCTTTGGCAAGCCCTGATGGCCGTGTTGTTGGTGGTGGCGTTGCTGGGCTTCTTGTAGCCGCCAGTCCTGTGCAGGTTGTGGTGGGCAGTTTTCTACCATTCGGGCAATCAGATCAGAAACCAAAGAAGCCCAAGTCTGGTTATGCACAAGCTCCTCCTGTTACCCCTGCAACTACAGTGGCTTCTGCAGCACCCACAAATAATGTTGAGAAAGAGGATGACAATGGCATAGCTGGACATGCGCTGCAGAACTCTGTGACTCTTAACTCAAACCTTACTTCTCCTTCAACCTTTCGACGAGAAAACTGGGTGAACTTGCACACCATGCCGGATTCGAGAAAGTCAGCTACTGATATTAACATATCCTTGCCTGATAGTTA 1028 0.4728 MEAREGISSGVTVIGAEAPSAYHVAPRSETPTQSHVPEAAAAGVAAVGASPVSVGIDGSSVKKKRGRPRKYGPDGSVTMALSPLPISSSVPPSNDFSSGKRGKTKGMEYKQHKRLGMENLGDLNASSVGTNFMPHIINVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGARSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPFGQSDQKPKKPKSGYAQAPPVTPATTVASAAPTNNVEKEDDNGIAGHALQNSVTLNSNLTSPSTFRRENWVNLHTMPDSRKSATDINISLPDS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00798 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 251 - -
Bva01g00798 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 341 IPR039605 GO:0003680
Bva01g00798 342 ProSiteProfiles PPC domain profile profile. 129 270 IPR005175 -
Bva01g00798 342 MobiDBLite consensus disorder prediction 81 100 - -
Bva01g00798 342 CDD DUF296 134 224 IPR005175 -
Bva01g00798 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Bva01g00798 342 Gene3D - 134 266 - -
Bva01g00798 342 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 341 - -
Bva01g00798 342 MobiDBLite consensus disorder prediction 251 290 - -
Bva01g00798 342 MobiDBLite consensus disorder prediction 55 104 - -
Bva01g00798 342 MobiDBLite consensus disorder prediction 268 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00798 Bva-Chr1 5674172 5679688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00798 10 280 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.940 3.51e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00798 - - gmx:100796830 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00798 01 5674172 5679688 Bva02g01737 02 19695906 19700821 BWGD