Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00766 ATGGGCCACTACCAATTGAAAAGGACTACTGATTGCAATTTATATTGCATGGCAGATATATCTGGGGATGGTTTTTGGGCAAGAGACATCACATTTGAAAACACAGCAGGCCCTCATAAGCACCAAGCAGTTGCCCTAAAAGTTAGCTCAGACAAATCTGTCTTCTACAAATGCAGCTTCAAAGGTTACCAAGACACTCTATACGTTCCTTCAAATCGACAATTTTACCGCGAGTGCCAAATTTACGGCACTGTAGATTTCATATTTGGGGATGCTGCAGCAGTTTTCCAAGACTGTGACATACTTGTAAGAAAACCAATGCAGGGTCAATCCAACTTCATCACTGCACAGGGAAGAGACATAAAAGATGAACCCACTGGTTTTGTCATCCACGGGTGCCGGGTTAGGCCTGCTTCTGATCTTTCCGCAGATTCAGGTTCATACAAGACCTACTTGGGCAGGCCATGGAAGCAATATTCTAGGACTGTTTTTTTGAAGACAGAGTTGGATGGGTTTATTGACCCAAAAGGGTGGACGGAATGGGAAGGAAGCTTTGCACTTTCAACGTTGTTCTATGGGGAGTATATGAACACTGGAAGGGGCGCATCAACCGGGAATAGGGTTAATTGGCCTGGTTTTCATGTgcttggagaagaagaagctagGGTTTTTACTGTGGGTCGTTTTATGGATGGAGATTCATGGATTCCTTCAAGTGGGATACCCTATTGGGGTGGACTTTA 743 0.4307 MGHYQLKRTTDCNLYCMADISGDGFWARDITFENTAGPHKHQAVALKVSSDKSVFYKCSFKGYQDTLYVPSNRQFYRECQIYGTVDFIFGDAAAVFQDCDILVRKPMQGQSNFITAQGRDIKDEPTGFVIHGCRVRPASDLSADSGSYKTYLGRPWKQYSRTVFLKTELDGFIDPKGWTEWEGSFALSTLFYGEYMNTGRGASTGNRVNWPGFHVLGEEEARVFTVGRFMDGDSWIPSSGIPYWGGL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00766 247 Pfam Pectinesterase 20 233 IPR000070 GO:0030599|GO:0042545
Bva01g00766 247 PANTHER PECTINESTERASE 19 245 - -
Bva01g00766 247 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 19 245 - -
Bva01g00766 247 SUPERFAMILY Pectin lyase-like 18 246 IPR011050 -
Bva01g00766 247 ProSitePatterns Pectinesterase signature 2. 81 90 IPR033131 -
Bva01g00766 247 Gene3D - 5 247 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00766 Bva-Chr1 5530879 5531622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00766 20 247 Carbohydrate Esterase AT3G60730 70.306 4.03e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00766 K01051 - gmx:100810741 355.14