Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00765 ATGATGTTGAAACGTGTTAATGATTTGTCCTTGTCCTTAGATCAGTTGAATGGTGTCAAGGATGTTCTCTATGATTTACATGAGAATGGTTTTTCTCTACTAAATCATCTCACAATACAACACAACAGTGAAATTGGGAGTATAGCAACGAGCTCAGGCAGTCCTCTTTATGCTTTCCCCAACTTGGAGACGGTGTCTCTTTACGATTTAAGCAATTTGGAGCACATATGTCACGGCTCTCTAACACAGGAGTCATTTTGCAAACTAAGGAGTGTCGAGATAAAATATTGTGAGAAATTGGTGACCATTTTTCCTGCATCTATTGTTAGAAATCTGCAAAATCTAGAGACTTTGATAGTCGGTTATTGCAATTTAGTGGAGGTAATTTTTGAATTCCAAGAgccaaatgataaaatatcatcCACTGGAAAGAGAATTCAATTGGAAATTCTAGCTTTAGACCACCTACCAAAACTGAAGCAGATATGGAATAACCCATACCTTCAGGGGACtttcaacttcaaaaatttaaagacaGTGTACGTTGAAGATTGTCCAATGCTCAGCTATGTCTTTCCATCTTCATTGGCCAACGATTTACGGCAGGTGAAGGCTCTTATTACTATTCAAAACAGTCCCTCAACAGATCCTTTTGAACAAAAAGGTTTGATTCCCATGTCATATTGCTTATTCTATATGGCAAGGATGATCTCTTCTACTGCCACCGCCTTGCTCTTCTTTCTGGCCATGGTGGCCACCGTCTCCGGCCTCAACGAAATGGAGGTCCTTGGGATGGCCCAAAGCCAGGTTATCCAAGCCAGAAATTGGATGGAAAGCTCTGTGAGCTTTAAAGAAGAGCATATGGGTCAAGGAGCTGTGGCCTTTAGAGACTGTGATAGGCTCTATGGTGATAGCCAGTTCCGGCTCTCTCAGATGCTGACCAAGGAGAGTACCCATACGAGAGACGATGCACGAAAACCATTACTGGAGGAAGGGTCAAAAGGAGGCCTGTTAGGATCATGGGAGCCAGCAGGGTCCAAGGCAGACTTCACGGTGGCACAGGATGGTTCGGGCAGCCACAAAACAATCAAAGAAGCACTCGATGCTTTGGCTGCAATGGGTCATAACCGTCCACCTCGAGCAGTTATCTATGTGAAATCAGGAGTATATAGTGAGAAAGTGCTGATTTCAGAAGCAATGAATAATGTGATGCTTCTTGGTGATGGCATAGATAAAACAGTTGTTACTGGTGACAGAGATATAGCTAGTTCTGGTTCCACTTTATCTTCATCTACAGTTGTTGAGTATGTCTATATAta 1319 0.4139 MMLKRVNDLSLSLDQLNGVKDVLYDLHENGFSLLNHLTIQHNSEIGSIATSSGSPLYAFPNLETVSLYDLSNLEHICHGSLTQESFCKLRSVEIKYCEKLVTIFPASIVRNLQNLETLIVGYCNLVEVIFEFQEPNDKISSTGKRIQLEILALDHLPKLKQIWNNPYLQGTFNFKNLKTVYVEDCPMLSYVFPSSLANDLRQVKALITIQNSPSTDPFEQKGLIPMSYCLFYMARMISSTATALLFFLAMVATVSGLNEMEVLGMAQSQVIQARNWMESSVSFKEEHMGQGAVAFRDCDRLYGDSQFRLSQMLTKESTHTRDDARKPLLEEGSKGGLLGSWEPAGSKADFTVAQDGSGSHKTIKEALDALAAMGHNRPPRAVIYVKSGVYSEKVLISEAMNNVMLLGDGIDKTVVTGDRDIASSGSTLSSSTVVEYVYI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00765 439 Pfam Pectinesterase 349 434 IPR000070 GO:0030599|GO:0042545
Bva01g00765 439 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 240 326 - -
Bva01g00765 439 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 336 433 - -
Bva01g00765 439 Gene3D - 344 436 IPR012334 -
Bva01g00765 439 SUPERFAMILY RNI-like 10 206 - -
Bva01g00765 439 PANTHER PECTINESTERASE 336 433 - -
Bva01g00765 439 Gene3D Ribonuclease Inhibitor 2 215 IPR032675 -
Bva01g00765 439 SUPERFAMILY Pectin lyase-like 345 433 IPR011050 -
Bva01g00765 439 PANTHER PECTINESTERASE 240 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00765 Bva-Chr1 5524821 5530341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00765 335 432 Carbohydrate Esterase AT3G60730 50.000 1.25e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00765 K01051 - gmx:100810741 149.443