Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00742 ATGGACATTCTTATCACTATTGGTGAAAAAATTGGTGAGTCTGCGGTTGCAGCGGTTGCACGTCAAGTGGGTTACCTGATTTTCTTTGGCAGAAATGTGAAGAACCTGAAATCCCAAGCGGATGAGCTGAAGAAGGCCAAAGAGAGGGTGCAACATGATATTAATGAAGCATCGTGGAATGctcaagaaattgaaaatgacGTGAATGACTGGCTGAACAAAGTGGATGTGGCGGTTGCAGAAGCAGAAGTCATCTATGGAGATAAAGGCAAAGGTTCTTGCCTGCATTTGTGGCAACGTCACCAGATCAGCAGGAAAGCTTCAAAGATGACACAGGAAATGGCAGAAATAcagacaaaaggaaaatttgatCGTGTTGGTTACCGTGATGCCCCACAAGCATTGAGGATCGCAGAAAGTGTAAAAGATTACAAGGCCCTTGAATCAAGAACAAACACCATCAAAGAAATCATGGAGACGCTGAAGGATAGCAGTATCCACACAATTGGAGTATGGGGGACAGGTGGTGTTGGCAAAACTACACTAGCCAAAGAAGTTCAAAGGCAATCGAAGGAAAAGAACTTGTTTGATGCTGTGGTTATGACAACCATAACTGATAATCCAAGTGTGGAACGAGTTCAAAAGGAAATTGCAGATTACTTGGGTCTGACATTTAATGTGAGTAGTGAAGAGGGAAGAGCAGACTTGTTGAAGaggagaataaagaaagagaaaagcatTCTTGTCATAGTTGATGATATTTGGGAAGGATTTGAGTTGGGACCTTTTGGAATTCCATTGGGTGATGAACACAAGGGATGCAAATTATTGTTAACATCTAGGAATCTAGATTTTTTGACTAGTAAAATGGAAATTCAAAAGGGTTTTCAACTAGATCttctgaaagaaaatgaggctCTTAGTTTATTTGAAAAGATGGCGGGGGATGTTGTGAAAGATAGGCAAGACATTGCAACTGAAATAGTGAAGCGTTGTGAAGGATTGCCTATTTTGATTGTTCCTCTTGCTAAGGCATTGAGAAATAAGGATGTATATGCTTGGAAGGATGCCTTGACAAAGCTGGAAAGTTTTGACAAACAAGGTGTGCATCAAAAATTGCACTCAGCTGTGGAACTAAGTTACAATAACTTAGAAAGTGAGGAAAAGTCACTCTTCTTGCTTATTGCTCTTCAAGGGCGCTATTATCTCTACAAGTATGACTTGTTAATCTTCAGTGTGGGGCTAAGTATATTTGAAGGTGTTAAAACTTTAGAAGATGCAAGAAATAGGCTTCATACTTTGACCAATGAGCTTAAGGATAAGAGTCTATTAATTGAAGATGCAAAGAGATGGGTTGCAATCCATGATGTATTCCGGAAAGCTGCTGTTTCATTGGCAACCAAGGATAAGACAGTTTTCAGCTTGAAAGTTTATTCTGAATTGGAAGAATGGCCAGGGTGGGATGATCTCCAGAAGTGCAAGCAAATCTTCTTACCTTGGTGTTATATGCCTCCTCTCCCAGAAAAACTGGAAAGTCCAGAGCTAGAAGTACTTGCACTAGAAAATCCAGGAAGCTATATGCCAATGACTGATTCCTTCTTTGAGGAGACCAGAAATCTTAAAGTCTTAGATATATGTGGCATGGATTGTACTCCGAAGCCACCAACGAGTCTTGTTTTCCTGCAAAAGCTTACTGCATTATACTTGTATCAATGCAACTTGGAAGACATAGCAATGGTTGGTGAGCTCACAAACTTAAAAATCCTTAGCCTCTCCAAATCCTATATCCAAGAATTACCAAGAGAAATTGGGAAGCTCCATCAACTGAGATTGCTTGATATGGATGCTTGCTACTATCTCAAAGTGATTCCACGCGATGTTTTATCAAACTTGACAAGCCTAGAAGAGTTCTATGTGGGAAATGGCTTTGTCAGTTGGGAAGTTGAGGtagaagggaagaaaaatgCTAGTCTGAATGAGCTGGGGGAATTGAAACATCATTTGACATCTATAGACTTGCCTGTTCCAGATGCTAATGTTTGGCCAGTGGACTTGTTCTTTGAAAAACTAGAAAGGTTCAGGATTTTTATTGGAGATGCATGGAGTTGGGGTGGTGTTTATGAGTCTAAAACATTGAAACTCAAGCTCAACAGGAGCATTCAATCAGAGCGTGGGATCAAAACAATGCTGAAACATGTTGATGATTTGTCCTTAGATGAGCTGAATGGTGTTAAGGATGTTCTCTATGATCTGCATGGGGGTGGCTTTCCTCTACTAAATCATCTCACTGTACAAAACAATGGTGAAATTGAAACTATAGCAGCCAGCTCCGGCCGTCCTCTTCATGCTTTCCCCAACTTGGAGACATTGTCTCTTTACAATCTAAGCAATTTGGAGCATATAAGTCATGGCTCTCTAACCCAGGATTCATTTTGCAAACtgaaaatcatcaaagttcaAGAATGccacaaattaaaatgtctcTTCATAAGTTCCATGTCTAAAGCCTTTTCCAGTCTTGTTGAAATAGAAGTTTCAAAATGTAGCCTCTTAGAGACACTAGTCCTCTCAGAAGAAGCAGAGTTTTCTGAATTGCACTCTTTGATGATAGAAGGGCTACCTGCACTCATCAGTTTCAGTTCCAGTGAAGCCAAACAAATTAATGGAGGAGACAACCTATCTTCTTTCCTGGTTCCACTTTTCAATGAGAAGGGCTCATTCCCCAAATTGGAGACAATGATAATTAGTCAGATTGTTGGCTTGACAACAATATGGAACCAACAAGTTAATACAAATTCCTTCTGCAAACTGAAGAGcattgagataaaatattgTGAGAAACTGGTGACCATCTTCCCTGCTTCCATTGTCATAAATTTGCATGAACTTGAGATTTTAACAATCAGCAATTGCAATTCATTGGAGGTTATTTTTGAACTCCAAGAGCCAAGTGATAAAATATCATCCACTGAGAAGAGCCTTCAATTGAAAAGTTTAAGTATAGTCCAGCTACCAAAACTGAAGCAGATATGGAATAACACAAACGTTCATGGGACTttcaactttgaaaatttagagaaagTGAATGTTGAAGATTGTCCAATGCTCAGCTATGTCTTTCCAGTTTCAGTGGCCAAACATTTAAAGCAGATGAAAGATCTTACCATTCAAAACAGTCCCACAACAGATCTTTATGGACTAAAAGGTGGGAGCTG 3215 0.3792 MDILITIGEKIGESAVAAVARQVGYLIFFGRNVKNLKSQADELKKAKERVQHDINEASWNAQEIENDVNDWLNKVDVAVAEAEVIYGDKGKGSCLHLWQRHQISRKASKMTQEMAEIQTKGKFDRVGYRDAPQALRIAESVKDYKALESRTNTIKEIMETLKDSSIHTIGVWGTGGVGKTTLAKEVQRQSKEKNLFDAVVMTTITDNPSVERVQKEIADYLGLTFNVSSEEGRADLLKRRIKKEKSILVIVDDIWEGFELGPFGIPLGDEHKGCKLLLTSRNLDFLTSKMEIQKGFQLDLLKENEALSLFEKMAGDVVKDRQDIATEIVKRCEGLPILIVPLAKALRNKDVYAWKDALTKLESFDKQGVHQKLHSAVELSYNNLESEEKSLFLLIALQGRYYLYKYDLLIFSVGLSIFEGVKTLEDARNRLHTLTNELKDKSLLIEDAKRWVAIHDVFRKAAVSLATKDKTVFSLKVYSELEEWPGWDDLQKCKQIFLPWCYMPPLPEKLESPELEVLALENPGSYMPMTDSFFEETRNLKVLDICGMDCTPKPPTSLVFLQKLTALYLYQCNLEDIAMVGELTNLKILSLSKSYIQELPREIGKLHQLRLLDMDACYYLKVIPRDVLSNLTSLEEFYVGNGFVSWEVEVEGKKNASLNELGELKHHLTSIDLPVPDANVWPVDLFFEKLERFRIFIGDAWSWGGVYESKTLKLKLNRSIQSERGIKTMLKHVDDLSLDELNGVKDVLYDLHGGGFPLLNHLTVQNNGEIETIAASSGRPLHAFPNLETLSLYNLSNLEHISHGSLTQDSFCKLKIIKVQECHKLKCLFISSMSKAFSSLVEIEVSKCSLLETLVLSEEAEFSELHSLMIEGLPALISFSSSEAKQINGGDNLSSFLVPLFNEKGSFPKLETMIISQIVGLTTIWNQQVNTNSFCKLKSIEIKYCEKLVTIFPASIVINLHELEILTISNCNSLEVIFELQEPSDKISSTEKSLQLKSLSIVQLPKLKQIWNNTNVHGTFNFENLEKVNVEDCPMLSYVFPVSVAKHLKQMKDLTIQNSPTTDLYGLKGGS 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00742 1071 PRINTS Disease resistance protein signature 332 346 - -
Bva01g00742 1071 PRINTS Disease resistance protein signature 958 974 - -
Bva01g00742 1071 PRINTS Disease resistance protein signature 168 183 - -
Bva01g00742 1071 PRINTS Disease resistance protein signature 241 255 - -
Bva01g00742 1071 SUPERFAMILY L domain-like 729 1060 - -
Bva01g00742 1071 PANTHER PHOSPHATASE, PUTATIVE-RELATED 929 1058 - -
Bva01g00742 1071 PANTHER PHOSPHATASE, PUTATIVE-RELATED 5 968 - -
Bva01g00742 1071 Pfam NB-ARC domain 151 382 IPR002182 GO:0043531
Bva01g00742 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 395 IPR027417 -
Bva01g00742 1071 Gene3D Ribonuclease Inhibitor 693 1067 IPR032675 -
Bva01g00742 1071 SUPERFAMILY L domain-like 487 814 - -
Bva01g00742 1071 Coils Coil 33 81 - -
Bva01g00742 1071 Coils Coil 424 444 - -
Bva01g00742 1071 Gene3D Ribonuclease Inhibitor 453 692 IPR032675 -
Bva01g00742 1071 Gene3D - 133 296 IPR027417 -
Bva01g00742 1071 PANTHER - 929 1058 - -
Bva01g00742 1071 PANTHER - 5 968 - -
Bva01g00742 1071 Gene3D - 300 385 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00742 Bva-Chr1 5412813 5416378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00742 166 438 WRKY Transcription Factor Family AT5G45050 25.839 8.36e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00742 - - mtr:MTR_2g072150 769.229