Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00737 ATGTCCGCCTCTTCCACTTCCTTTTCACCGGACCAGCACCTCTCTCCTTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTAAGTGTTCCTTGTACCAGTTTGTTCAAGACTGTCACGGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTGAATATGCGTGGGCTGCTACTTCCAGCTGCCAATCAGCTTCACCTTGGACAAGCTTTCTTCACCCCTCAAAATCTTCTGGAGGAGATTCGAAATGCACCATCATCAAATATGCTCATGAATAATCAACTCCCGAACCCGAATGATCATTCAGCTTTACCACTGCGGGGAGGACTTGAAGAAATCACTAAACCTCCACCAGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCAGATATAAGCCACAGAGAGGCCTTTAGTGCTGCTGCAAAGAATTGGGCCCATTTTCCTCACATTCACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGCCAGGAAGGAGAGGACATTCTTATGAGAGATGGCTTTTTCCCACCGGCTAATGTAGGTGTCTCTCCCTATTA 656 0.4848 MSASSTSFSPDQHLSPSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGQAFFTPQNLLEEIRNAPSSNMLMNNQLPNPNDHSALPLRGGLEEITKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDILMRDGFFPPANVGVSPY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00737 218 Gene3D High mobility group box domain 122 178 IPR036910 -
Bva01g00737 218 Pfam YABBY protein 18 182 IPR006780 GO:0007275
Bva01g00737 218 PANTHER PROTEIN YABBY 6-RELATED 1 216 IPR006780 GO:0007275
Bva01g00737 218 PANTHER PROTEIN YABBY 4 1 216 - -
Bva01g00737 218 SUPERFAMILY HMG-box 127 176 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00737 Bva-Chr1 5387937 5390280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00737 29 216 C2C2-YABBY Transcription Factor Family AT4G00180 63.158 3.90e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva01g00737 YABBY 7.5e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00737 K25796 - gmx:100781267 392.119