Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00731 ATGAAGGCCGTGCCCTTACCCTTTGAGGAATTTCGAGGGAAGGGGGTTTTAGATTTGGGTGGTGTTCCAGATTCATTTTCTCTGCCTCAAGAGGAAGTGCTGCTGCAGCTGCAGAAGTGGAATACCCAGAAAGAGCATTGCTATGTGGGCACTGAGCCCACCTCTGTTTTGGACGTTGCAAGGAACCCAAGCCCTCCTACTTCCTCTTCCACACTGTCTTCTTCACGCGGCAGCAGCGGCGGCGGCGTCGGCTCAACCGACAGCTCCACCGGCGCGGCGGCGAGAGTCTCCGACAACCACCCACCTCAGCCGTTAGAGGCAGCACAGGAAAGATGCGGGTTGGGAATGGAGGACTGGGAAAGCGTCTTGTCTGAGTCGCACGGTCAAGATCAGTCTATTCTGAGATTGATTATGGGCGACATTGAGGACCCAGCTGTGGGATTGAGCAAGCTTTTGCAGACTGGCACTGCTGCTTCTTCTCAAGATGTTGAATTCAATGGTGGCTTCACTGTCATGGATCAAAGTTCTGTTCTTGACCCCATTTCCAGCGCCAATTTCGCGCCTACCATTGACACTACAGCACCTGGGAATTACTCCGATTTCCCCTTCAGAGTTGTAAATCCGAGCCCGTTTCCTGCTTCTGCCACCAACAATCTCTCCCCGGTTTCACTATTTCACTCTCAgcaacaacagcagcagcaacccATTGAGTCTATAGACGAGAAGCCTCATGTTAATCCACAGTTTTTTCTAAACCAGAATCAAGCTCAGTTTATGCAGAACCCAGCTCTGTTCATGCCCGTGACATTTGCAACGCAGTTGCAAGAGCATCACCAGCTTCAATCTCAGCCTCCACCTGCGAAGCGCCTTAATTGTGGGCCTATTGGCGTTGGGGCCAACTTCCAGCTCCCAAAGTCACCGTTTTTAGATTCTGGGCAAGACTTATTTCTGCGACGGCAGCAGCAGCAGTTTTACCATCTGCAACAACAACACCAGCAGCGACCACCCATGGTTGTAAcagcggcggcggcggcggttCCAAAGCAGAAAATAGTGAGCCCCAACGGCGAAGACTTGGCTACCCACCAGCTTCAGCAGGCTTTAACTGACCAGCTTTCCAAAGCCGCAGAGCTGATCGAAACCGGTAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCGATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTATATCAAGGAGACCTTGCAATTACTTCCCCATTCGAACCCAGTAAACAATTCCAATTCCTTCTCTCCCACTGGTCTAATCTGGAAAATAGGAGCTTACAAGTCATTCTCTGAAATCTCACCGCTTCTTCAATTTGCCAATTTCACCTGTAACCAAGCTTTACTCGAAGCTGTCGATGGCTCTGATCGAGTTCACATCGTAGATTTTGATATTGGTTTTGGTGGGCAATGGGCTTCTTTCATGCAAGAGTTAGCTCTGAGAAATGGTGGTGCCCCATCGCTCAAAATCACAGCTTTCGTATCTCCCTCAAACCATGACCAAATTGAGCTCAGCTTCACCGAAGAGAATCTGAAGCAGTATGCTAGTGAGATTAACATGCCCTTTGAGCTTGAGGTTCTGACCCTTGAGTCTCTGAACCCAGCTTCTTGGCCTCAACCTCTTGGCGATTGCGAAGCCATTGCTGTTAACTTACCGGTTGCTTCTTTTGCCAATTACCCATCTTATCTCCCTCTAGTGCTTCGCTTTGTGAAGCAACTCATGCCCAAAATTGTGGTCACTTTGGACAGGAATTGCGATCGGATTGATTTGCCATTTGCCCAGTTCATAATTCAAGTTCTGGGTTCATATTCAGCACTGCTAGAGTCACTAGATGCTGCTAGTGTTAACCCAGATGTGATTCAGATGATTGAGAAGTTTTTTCTGCAACCAGCAACGGAGAAGCTCGTGATGGGTCGTTCTCGGTTGCGGGAGAGAGCACATCCATGGAAGAATTTGCTTATGACTTGTGGGTTTGCACCATTTCCGTTTAGCAATTTTACAGAGTCACAAGCAGAGTGTCTGGTTCAGAGGAGTCCTGGTAGAGGGTTCCATGTGGAGAAGATGCAATCTTCACTTGTCCTGTGCTGGCAGAGAAAGGAACTCATCTCAGTTTCAACTTGGAGATGCTG 2177 0.4791 MKAVPLPFEEFRGKGVLDLGGVPDSFSLPQEEVLLQLQKWNTQKEHCYVGTEPTSVLDVARNPSPPTSSSTLSSSRGSSGGGVGSTDSSTGAAARVSDNHPPQPLEAAQERCGLGMEDWESVLSESHGQDQSILRLIMGDIEDPAVGLSKLLQTGTAASSQDVEFNGGFTVMDQSSVLDPISSANFAPTIDTTAPGNYSDFPFRVVNPSPFPASATNNLSPVSLFHSQQQQQQQPIESIDEKPHVNPQFFLNQNQAQFMQNPALFMPVTFATQLQEHHQLQSQPPPAKRLNCGPIGVGANFQLPKSPFLDSGQDLFLRRQQQQFYHLQQQHQQRPPMVVTAAAAAVPKQKIVSPNGEDLATHQLQQALTDQLSKAAELIETGNPELAQGILARLNHQLSPIGKPFQRAAFYIKETLQLLPHSNPVNNSNSFSPTGLIWKIGAYKSFSEISPLLQFANFTCNQALLEAVDGSDRVHIVDFDIGFGGQWASFMQELALRNGGAPSLKITAFVSPSNHDQIELSFTEENLKQYASEINMPFELEVLTLESLNPASWPQPLGDCEAIAVNLPVASFANYPSYLPLVLRFVKQLMPKIVVTLDRNCDRIDLPFAQFIIQVLGSYSALLESLDAASVNPDVIQMIEKFFLQPATEKLVMGRSRLRERAHPWKNLLMTCGFAPFPFSNFTESQAECLVQRSPGRGFHVEKMQSSLVLCWQRKELISVSTWRC 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00731 725 MobiDBLite consensus disorder prediction 57 96 - -
Bva01g00731 725 MobiDBLite consensus disorder prediction 56 106 - -
Bva01g00731 725 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 8 724 - -
Bva01g00731 725 Pfam GRAS domain family 369 724 IPR005202 -
Bva01g00731 725 ProSiteProfiles GRAS family profile. 359 724 IPR005202 -
Bva01g00731 725 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 724 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00731 Bva-Chr1 5338636 5341556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00731 367 725 GRAS Transcription Factor Family AT4G00150 59.945 7.30e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva01g00731 GRAS 9.2e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00731 - - gmx:100805945 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00731 01 5338636 5341556 Bva01g00731 01 5338636 5341556 ECH