Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00699 atgttgGACTATGAATGGGGGAACCCATCTACCATAATGCTCAACGGGAACGAAGAAGCCGCCGCCGCCGCAGCAGCAGCAGCTCAAGACTCCAACCAAAGCAACCGGCAAATCTTCGAACACTATGCTTCCCATGCCTTATTACCTGACTTCCTTCTTTCTCACTCACAACACGGCCCCACACCCAACAGCGCCACCGCAGATTTCTCTCCCCAcccccaccaccaccaccactttAACCCCCAATCCCACCATCAACAGCATATTCACCACTCGTTCTTCGACCCACGCGCGTTCCCCGGAGCGTCGATGCCCTTTCCCGCTCCACCACCTGCTCCACCTTCTGTTCTCTCCCTTGACCCACTCCCAACCGTCAACGCCAACTGTGGGCCTGGGCTTCTGGTCGTTCCGAAATCCGAGGATGTCGGTCGGCCCTTGGACTTCTCGGCATCCAGAATTGGGCTTAACTTGGGTGGCCGTACATATTTCTCGTCCGACGATGACTTCGGGACCCGACTCTACCGCCGGTACAGACAGGCTGAACCGGGAACGACGTCGTCTAACTCCCCCAGGTGCCAAGCCGAGGGCTGCAATGCTGATCTGTCCCATGCCAAGCATTACCACCGTCGCCACAAGGTCTGCGAGTTTCACTCCAAAGCTGCCACCGTCATTACCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGTAGCAGGTTCCATCTTCTTTCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGGCTAGCAGATCACAATCGTCGTAGGCGAAAAACCCAGCAGCCAATTCAAGAAATTCAGAAACCTAACATTGAAAATGCTCGGATAAATTCTAATTTGGAAAATGTGGCAACAGGGTCCCCGCCGGACTCCGGAGCTCCGTCCTCGTCCGTGACGGTGGCGGTGTCACCGCCGGATTATTTCCGGCAGAGGCCATATCAAAGCACAAGCTCATCAACAACATCAGGCTCACTGTTTTTCTCGAGTGGGTTTTGTGGAGGACTTGGTCTATTTGGCCATGGTGTTGAAGAGGCAAATGTGCATGAGGATGTGTTTCAATCTCAGCTCACCCACTCAAGTGGTGCAACTATTAATGCATTTATGGTGAGGAAGCAAACAAATGAACCAATAAAAGCTTGGTG 1163 0.5202 MLDYEWGNPSTIMLNGNEEAAAAAAAAAQDSNQSNRQIFEHYASHALLPDFLLSHSQHGPTPNSATADFSPHPHHHHHFNPQSHHQQHIHHSFFDPRAFPGASMPFPAPPPAPPSVLSLDPLPTVNANCGPGLLVVPKSEDVGRPLDFSASRIGLNLGGRTYFSSDDDFGTRLYRRYRQAEPGTTSSNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVITAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPIQEIQKPNIENARINSNLENVATGSPPDSGAPSSSVTVAVSPPDYFRQRPYQSTSSSTTSGSLFFSSGFCGGLGLFGHGVEEANVHEDVFQSQLTHSSGATINAFMVRKQTNEPIKAW 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00699 387 MobiDBLite consensus disorder prediction 288 308 - -
Bva01g00699 387 MobiDBLite consensus disorder prediction 53 90 - -
Bva01g00699 387 Gene3D - 183 253 IPR036893 GO:0003677|GO:0005634
Bva01g00699 387 ProSiteProfiles Zinc finger SBP-type profile. 189 266 IPR004333 GO:0003677
Bva01g00699 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 91 321 IPR044817 GO:0003677
Bva01g00699 387 SUPERFAMILY SBT domain 190 269 IPR036893 GO:0003677|GO:0005634
Bva01g00699 387 Pfam SBP domain 192 265 IPR004333 GO:0003677
Bva01g00699 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 91 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00699 Bva-Chr1 5067992 5071469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00699 1 239 SBP-box Gene Family AT1G02065 46.457 1.05e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva01g00699 SBP 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00699 - - gmx:100802206 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00699 01 5067992 5071469 Bva01g00699 01 5067992 5071469 ECH