Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00683 ATGCACCTTgtcctctctctttctgtgGCTACAGTAAGCTTCTCCATCTTGGGTAAACGTATCAACATGGAAAGTGATGCTCAGGACAACTTCTCTGCCtcctccttctctttcttcactGCCACCGCCACCACCGCAACCACAAtcacctcctcctcctccatcACTTCATCAACATTATCATCACCAACATCTTCTACTTCGAACGCAACTACTTCAGGTACCAAGAAAGATTCCAAAAGTCCTCAAAAGGGATCTGCAGACATGGAAAATGGCAAGGAGAGCAAGAAAAGGCAGAGAAGTGATAATGATGGAAAGCAGCATCCTACATATAGAGGTGTTAGAATGAGAAGTTGGGGTAAATGGGTGTCAGAGATCCGAGAaccaagaaagaaatcaagaatATGGCTTGGAACCTATCCTACTGCAGAAATGGCAGCTAGAGCCCACGATGTAGCTGCTTTAGCCATCAAGGGTCATTCAGCTTACCTCAATTTCCCTGAATTGGTCCAAGAGCTTCCCCGGCCGGCCAGCAAGTCTCCCAAGGACATCCAAGCGGCGGCTGCAAAGGCAGCCGCCACGGTGGCCGAGGAGGTTAAGCATTATCAAGCAGATGCTGAAGCTGAGCCGAGCCAGACTGAGCAACCGTCATCTTCTTCAACTCTCTCCTTGGATAATACTCAAGAATCTACTAGTTCTCCTACTTCTAATCATGAAGATGACACGCTGTTTGATCTGCCAGATCTTTTCACAGATGGAAACAATGGGTTTTTCTCCAATACTTCTTCTTCATGGCATTTGTGTGCAGTTGACAGTGGTTTCCGGCTTGAGGAGCCATTTTTGTGGGAGAATTACTA 857 0.4271 MHLVLSLSVATVSFSILGKRINMESDAQDNFSASSFSFFTATATTATTITSSSSITSSTLSSPTSSTSNATTSGTKKDSKSPQKGSADMENGKESKKRQRSDNDGKQHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELVQELPRPASKSPKDIQAAAAKAAATVAEEVKHYQADAEAEPSQTEQPSSSSTLSLDNTQESTSSPTSNHEDDTLFDLPDLFTDGNNGFFSNTSSSWHLCAVDSGFRLEEPFLWENY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00683 285 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Bva01g00683 285 Gene3D AP2/ERF domain 110 169 IPR036955 GO:0003700|GO:0006355
Bva01g00683 285 MobiDBLite consensus disorder prediction 208 240 - -
Bva01g00683 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 285 - -
Bva01g00683 285 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 MobiDBLite consensus disorder prediction 50 80 - -
Bva01g00683 285 MobiDBLite consensus disorder prediction 200 244 - -
Bva01g00683 285 Pfam AP2 domain 109 160 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 MobiDBLite consensus disorder prediction 50 113 - -
Bva01g00683 285 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 MobiDBLite consensus disorder prediction 81 111 - -
Bva01g00683 285 CDD AP2 111 169 IPR001471 GO:0003700|GO:0006355
Bva01g00683 285 PANTHER ETHYLENE RESPONSE FACTOR 32 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00683 Bva-Chr1 4983719 4984697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00683 98 281 AP2-EREBP Transcription Factor Family AT2G44940 56.522 1.02e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva01g00683 AP2 3.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00683 - - gmx:100801129 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00683 01 4983719 4984697 Bva01g00683 01 4983719 4984697 ECH