Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00681 ATGTTTGGGCGTGCACCAAGGAAGAGTGATAACACCAAATATTATGATGTTCTTGGTGTTTCTAAAAGTGCTAGTGAAGATGAACTTAAGAAAGCTTATAAAAAGGCTGCaatgaagaatcatccagATAAAGGTGGAGATCCTGAGAAGTTCAAGGAGATATCTCAAGCATATGAAGTTCTCAGTGATCCTGAAAAGAGAGAATTGTATGACCAATATGGTGAAGATGCCCTTAAAGAGGGAATGGGGGGAGGAGGTGGCCCATTTCATAATCCatttgatatatttgaatCATTCTTTGGTGGAGGGCCCTTCTCTGGTGGCGGTAGCTCACGTGGAAGAAGGCAGAAACATGGTGAAGATGTGGTGCATAGCTTGAATGTTACTTTGGTAGACCTGTACAATGGCACATCAAAGAAACTCTCTCTTTCTAGAAATATATTATGCCCAAAATGTAGAGGGAAAGGTTCAAAGAGTGGAGCTGCTGGGAGATGTTTTGGTTGCCAAGGAACGGGTATGAAGATTACCACAAGACAGATTGGACTGGGCATGATTCAACAGATGCAGCACGTCTGTCCTGAATGCAGGGGAAGTGGTGAGGTCATTAGTGAGAGAGATAGATGTACTCAGTGTAAAGGAAGCAAGGTCACCCAGGAGAAGAAGGTGCTGGAGGTGAATGTTGAAAAAGGGATGCAGCAGGGTCAGAAGATTGCGTTTGAAGGACAAGCTGATGAAGCTCCTGACACAGTCACTGGAGACATTATTTTTGTCCTACAAGTAAAAGAGCACCCCAAGTTCAAGAGGAAGCAAGATGACCTCTATATTGAGCACAACCTCAGTTTAACTGAGGCTCTTTGTGGCTTCCAATTCGTACTCACCCATCTTGATGGGAGGCAACTATTGATAAAATCAAACCCTGGGGAAGTCATCAAGCCTGGTCAATATAAAGCAATAAATGATGAGGGAATGCCACAATACGGTAAACCATTCATGAAGGGTCGGCTTTACATCATATTCAATGTCGATTTCCCAGACTCCGGGCTTCTTTCCCCTGACCAATGCCGGTTATTAGAAACAGTCTTACCTCAGAAGAAGAGCAAGCAGTTGACAGATATGGAGCTGGACGATTGTGAGGAGACCATCCTGCACAACGTCGACATTGAGGAGGTGATGAGACGGAAGCAGCAGCAACATCACCACGAGGCTTATGatgaggatgatgatgatgatgaaccATCTGGGCCGCGGGTGCAATGTGCTCAACAGTA 1268 0.4314 MFGRAPRKSDNTKYYDVLGVSKSASEDELKKAYKKAAMKNHPDKGGDPEKFKEISQAYEVLSDPEKRELYDQYGEDALKEGMGGGGGPFHNPFDIFESFFGGGPFSGGGSSRGRRQKHGEDVVHSLNVTLVDLYNGTSKKLSLSRNILCPKCRGKGSKSGAAGRCFGCQGTGMKITTRQIGLGMIQQMQHVCPECRGSGEVISERDRCTQCKGSKVTQEKKVLEVNVEKGMQQGQKIAFEGQADEAPDTVTGDIIFVLQVKEHPKFKRKQDDLYIEHNLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQYGKPFMKGRLYIIFNVDFPDSGLLSPDQCRLLETVLPQKKSKQLTDMELDDCEETILHNVDIEEVMRRKQQQHHHEAYDEDDDDDEPSGPRVQCAQQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00681 422 CDD DnaJ_C 120 346 - -
Bva01g00681 422 CDD DnaJ_zf 149 215 IPR001305 GO:0031072|GO:0051082
Bva01g00681 422 Pfam DnaJ domain 13 71 IPR001623 -
Bva01g00681 422 PRINTS DnaJ domain signature 66 85 IPR001623 -
Bva01g00681 422 PRINTS DnaJ domain signature 46 66 IPR001623 -
Bva01g00681 422 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva01g00681 422 SUPERFAMILY HSP40/DnaJ peptide-binding domain 266 346 IPR008971 GO:0006457|GO:0051082
Bva01g00681 422 CDD DnaJ 14 63 IPR001623 -
Bva01g00681 422 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 422 IPR044713 GO:0006457|GO:0030544
Bva01g00681 422 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Bva01g00681 422 Gene3D - 149 215 - -
Bva01g00681 422 Gene3D - 263 345 - -
Bva01g00681 422 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 146 218 IPR036410 -
Bva01g00681 422 SMART dnaj_3 12 66 IPR001623 -
Bva01g00681 422 MobiDBLite consensus disorder prediction 392 422 - -
Bva01g00681 422 Pfam DnaJ central domain 149 215 IPR001305 GO:0031072|GO:0051082
Bva01g00681 422 Gene3D DnaJ domain 10 112 IPR036869 -
Bva01g00681 422 SUPERFAMILY HSP40/DnaJ peptide-binding domain 115 274 IPR008971 GO:0006457|GO:0051082
Bva01g00681 422 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Bva01g00681 422 SUPERFAMILY Chaperone J-domain 9 108 IPR036869 -
Bva01g00681 422 Hamap Chaperone protein DnaJ [dnaJ]. 10 372 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva01g00681 422 Gene3D - 119 256 - -
Bva01g00681 422 ProSiteProfiles Zinc finger CR-type profile. 136 220 IPR001305 GO:0031072|GO:0051082
Bva01g00681 422 PANTHER CHAPERONE PROTEIN DNAJ A6 7 422 - -
Bva01g00681 422 Pfam DnaJ C terminal domain 123 344 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00681 Bva-Chr1 4964977 4969284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00681 14 73 C2H2 Transcription Factor Family AT1G74250 43.478 3.01e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00681 K09503 - gmx:100800590 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00681 01 4964977 4969284 Bva01g00681 01 4964977 4969284 ECH