Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00671 ATGTTCTCCAATTTCAGTTTGTTTGCCTCGTTCCTCTGCCGCCATCTATCTACCGCCACGAACCTCCCGAACCTCTCAAAACTCCCCGTCAAGCACAGGAAACTAGCAATCCGAGAAGCACAGAAGGCCCTTGTTGATTATCTCCATGGCACCAGGTCCTTGCCCTTTGCCTACGCCGAGTACATTGGCAGGAACTCTCTTCTTTCCCTCGATAATCTCATTTCTAAGGTGGAGTTTTCGCCTTCGAGTTTCCCAAAAAGCTTCAAAAAATTCCTGAGGTACCACCCGATTAAcgagtttgaatttttctttgaaagtaTTGGCATAGACTACAATGACGTTCCTGGGCTGTTGCCTGTGAAAAAGTTCTTCTTTTCAGAAGATAAGTCTCTTCTTGATGCAGCTTCTGCACTTTCAGATTTTGGGTTTCCGTGGAAAATGTTGGGTATGTTGTATAGGGAGAGGAGTTCCATTTTCAGGAGAAGTGCGCTAGAGTTGAAGTCTAAGCTTGGTGAGTTTATCAAATATGGGTTTAGTTATATTCAAGTGGCTGGTATATGCTTTGCTTTTCCTCACGTATTAAGTGAGCAGGGTCAAGCGGGTACTGAAACTGACGCCTTGTTTACTGATCTGAAGACagtatttttagattttggtTTGGCAGGATCTGTTGAGCTAAATGTGGATGCTTGGTATGGGTTATGTAGGAAAATTCGAGTGTTTTACGATTTATATGGTGGGAAGGGGAAGATGGGAGAGCTCTTAGGAAGgaacaaaaacatatttattgaaCACAGTGAAGAGGAGATAATTCAAAAGGTAGTGTACTTCCGTAGATTTTCTGTCAATAAAGAGGAAGTGGCTCTTTTGCTTCTACAGGGCTCGGAATTGTTGAAACATGATCTGGAAACCCCAGTGATTTCTGTTTTCCAGTTACTAGAGCACTTAGACTTGGGTTCTGAAGATTTGAAGGATGTTAGTGAAAATTATCCTCATGTGCTGGGAATGAACAAAATGGTTAATCTGCCTGATGTATTGAGGGCTTTGAATTTGCATGAGTGGTTCTTCAATAAGATTAAGGATGGAAATCATCAGTTGTTACTGAATTATATTACAAGCTATCCTATTGGAGACCCAGATAAAGAATATCTAGATGGCTTAGAGAGTATTCGTGTTTCAAGAACCCCAGCTCATACCTTTAGTAAATTAGATTATTTGCACGGCTTGGGCTTTGGTCAAAATGCTATGACCTTGAAGATATTATCTTACATGCATGGTAGTAGAAGCAAGATACAGGAAAGATTTGATTGTATGCTCTCATTAGggattgaattttcaaaactctGCCGGATGATAACTATCAGCCCAAAGATTCTAAACCAAAACCCTAAAGCCTTACAACGAAAAGTGAATTACCTTGTTCAGGGAATGGGAACCTCTTTAGAGTATCTGAGCATTTTTCCagcttatttgaattttgacttAGAGAAGCGTATCAAGCCTAGGTACAGATTTCATTTGTGGATGATAGAAAAGGGTCTGTCTACAAGAGACTATTCCATTTCAAGCTTGATTGCATCCAGTGAAAAGCTTTTTGTCAATCGTGCTTTCAAGATTCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTTGCCCGCAAAGTGTCTTG 1670 0.3892 MFSNFSLFASFLCRHLSTATNLPNLSKLPVKHRKLAIREAQKALVDYLHGTRSLPFAYAEYIGRNSLLSLDNLISKVEFSPSSFPKSFKKFLRYHPINEFEFFFESIGIDYNDVPGLLPVKKFFFSEDKSLLDAASALSDFGFPWKMLGMLYRERSSIFRRSALELKSKLGEFIKYGFSYIQVAGICFAFPHVLSEQGQAGTETDALFTDLKTVFLDFGLAGSVELNVDAWYGLCRKIRVFYDLYGGKGKMGELLGRNKNIFIEHSEEEIIQKVVYFRRFSVNKEEVALLLLQGSELLKHDLETPVISVFQLLEHLDLGSEDLKDVSENYPHVLGMNKMVNLPDVLRALNLHEWFFNKIKDGNHQLLLNYITSYPIGDPDKEYLDGLESIRVSRTPAHTFSKLDYLHGLGFGQNAMTLKILSYMHGSRSKIQERFDCMLSLGIEFSKLCRMITISPKILNQNPKALQRKVNYLVQGMGTSLEYLSIFPAYLNFDLEKRIKPRYRFHLWMIEKGLSTRDYSISSLIASSEKLFVNRAFKIHPAAPKHWFEQFARKVS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00671 556 Pfam mTERF 238 339 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 Pfam mTERF 424 532 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 Gene3D Transcription termination factor 3, mitochondrial 381 554 IPR038538 -
Bva01g00671 556 Gene3D Transcription termination factor 3, mitochondrial 226 359 IPR038538 -
Bva01g00671 556 Gene3D Transcription termination factor 3, mitochondrial 65 211 IPR038538 -
Bva01g00671 556 SMART mt_12 252 283 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 SMART mt_12 449 480 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 SMART mt_12 481 515 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 SMART mt_12 418 444 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 SMART mt_12 149 179 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 PANTHER CGI-12 PROTEIN-RELATED 20 551 IPR003690 GO:0003690|GO:0006355
Bva01g00671 556 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 20 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00671 Bva-Chr1 4884069 4886670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva01g00671 mTERF 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00671 - - qsu:111994091 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00671 01 4884069 4886670 Bva01g00671 01 4884069 4886670 ECH