Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00656 atggaagagaaatcAATTGCACTTGATGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCCCTTGAGGAAGTTTTTGATCATCTTAAATGTACAAGAGAAGGTTTGTCCTCTGACCAAGTAAAACAGCGGTTGGATCTCTTTGGTTATAACAAGcttgaagaaaagaaggaaagtaaatttttgaagtttttgggATTTATGTGGAATCCACTGTCATGGGTTATGGAAGCTGCTGCTCTCATGGCCATTACTCTTACACATACAAAGGGAAAACCTGCGGATTATCAAGATTTTGCTGGCATAGTTATGTTGCTATTTATAAACTCTACCATCAGTTTCATAGAAGAAAACAATGCTGGAAATGCAGCTGCTGCTCTTATGGCCCGCTTGGCACCAAAAGCAAAGATACTTCGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTTTTGGTTCCTGGGGACATAATCAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTTCTTGAGGGAGATCCTTTAAAGATCGATCAGGAAGTTTCCTCATCATACTTTGTGTCTGTTTCAGTCTGCTCTAACTGGAGAGTCACTCCAGTCACCAAAAATCCTGGAGATGGCGTATATTCCGGTTCGACTTGCAAGCAAGGTGAAATTGAAGCTGTAGTTATTGCAACTGGAGTTCACACTTTCTTTGGAAAGGCAGCTCATCTTGTGGAAAACACCACACACATTGGACATTTCCAGAAGgttcTAACATCTATAGGAAACTTTTGTATCTGTTCCATTGCTGTGGGGATGTTTATTGAAATCATTGTTCTATCTGCGTTTCAAAGGCAAAGGGGCTATAGAGTTGCTGTTGATAACCTTCTTGTGCTTCTAATTGGTGGAATTCCTATTGCCATGCCAACTGTTCTTTCTGTTACAATGGCAATTGGCTCACACCGGTTATCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCAATTGAAGAAATGGCTGGAATGGATGTGCTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTTCTGTGGATAAGAATCTGATTGAGGTTTTTGCCAGAGATGTTGACAAGGATACGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAAAACCAGGATGCCATTGATTGTGCCATTGTTTCAATGTTGGGAGACCCAAGGGAGGCACGATTCGGAATAAAAGAAGTTCACTTCCTTCCATTTAATCCAACTGATAAAAGAACAGCACTGACATACCTTGACAGTGCTGGTAAGATGCAGAGAGTTAGCAAAGGTGCACCGGAGCAGATTCTCAATCTTTCACATAACAAATCAGAAATTGAGAAGAAAGTTCATACAATCATTGACAAGTTTGCAGAACGTGGACTTCGGTCTCTAGCTGTTGCTCGCCAGGAAGTGCCTGAGGGAACTAAAGACAGTCCAGGAGGCCCTTGGGAATTTGTTGGCCTTCTCCCTCTCTTTGACCCTCCTCGCCATGATAGTGCTGAAACAATCAGAAGAGCTCTGGATCTTGGTGTCAGTGTCAAAATGATCACAGGTGACCAACTTGCAATCGCCAAGGAAACCGGAAGGCGTCTAGGGATGGGCACTAACATGTATCCATCATCATATTTGCTTGGTGACAACAAAGATGGAAAAATTGCTCTTCCTGTTGATGAGCTCATTGAGAATGCTGATGGTTTTGCTGGTGTCTTTCCTGAGCATAAGTATGAGATTGTGAGTAGATTACAATCTAGAAAGCACATCTGTGGAATGACTGGTGATGGAGTCAATGATGCACCTGCCTTGAAGAAAGCAGACATAGGCATTGCTGTAGCAGATTCCACAGATGCTGCCAGAGGTGCTTCTGACATAGTTCTCACTGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTCTAACCAGCCGCGCAATATTCCAAAGAATGAAAAACTACACAATATATGCTGTATCTATCACTATTCGTATTGTGCTAGGTTTTATGTTACTGTCTTGCTTTTGGCAATTTAACTTCCCTCCTTTCATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCATCTCCTCTTCCAGATAGTTGGAAGCTTAGTGAAATTTTCGCGACGGGGATTGTCCTAGGCAGCTACCTGGCTATAACAACTGTAATATTCTTCTGGGCAACCTATGAAACTACCTTCTTCCCTGACAAATTTGGTGTGAGGCACTTAAATAAACATGCTAATATTGACTCCATTGAACTGAGTAAGATGCTGGGATCTGCTGTGTATCTTCAAGTCAGTACGATCAGTCAAGCCTTGATATTTGTCACAAGGTCCCGAGGATGGTCTTACACAGAAAGGCCTGGCCTTTTGCTTGTTTGTGCTTTTATTATTGCTCAACTGGTTGCAACTGTTATATCTGCAACTGTCAGTTGGAACCGTGGTGGAATCAGCAGCATAGGTTGGGGCTGGACTGGAGTTATCTGGCTGTAcaacattataatttatatattcctGGATCCTATTAAATTTGGTGTTGGCTATGCATTGAGTGGAAGGGCATGGAATCTGATGACTGCATTtaccaacaaaaataactttggAAGAGAAGCGCGAGAAGCTGCATGGGCTGCCGAGCAGAGAACACTGCATGGCCTTCAGTCTGCTGCCAAGAACCACTCAGAGAAGCACACTTTGAGAGAAATAAACACATTGGCAGAAGAGGCTAGGAGGAGAGCAGAGATAGCAAGGTTGCGGGAGCTTCACACTCTGAAAGGAAAAGTGGAATCATTTGCCAAGCTAAAGGGTTTGGACATTGAGGCTGTCAATGGGCACTACACCGTgta 2900 0.4166 MEEKSIALDAIIKEAVDLENIPLEEVFDHLKCTREGLSSDQVKQRLDLFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAALMAITLTHTKGKPADYQDFAGIVMLLFINSTISFIEENNAGNAAAALMARLAPKAKILRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQEVSSSYFVSVSVCSNWRVTPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMFIEIIVLSAFQRQRGYRVAVDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFARDVDKDTVVLMAARASRLENQDAIDCAIVSMLGDPREARFGIKEVHFLPFNPTDKRTALTYLDSAGKMQRVSKGAPEQILNLSHNKSEIEKKVHTIIDKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSYLLGDNKDGKIALPVDELIENADGFAGVFPEHKYEIVSRLQSRKHICGMTGDGVNDAPALKKADIGIAVADSTDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLSCFWQFNFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGIVLGSYLAITTVIFFWATYETTFFPDKFGVRHLNKHANIDSIELSKMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVCAFIIAQLVATVISATVSWNRGGISSIGWGWTGVIWLYNIIIYIFLDPIKFGVGYALSGRAWNLMTAFTNKNNFGREAREAAWAAEQRTLHGLQSAAKNHSEKHTLREINTLAEEARRRAEIARLRELHTLKGKVESFAKLKGLDIEAVNGHYTV 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00656 966 SFLD Haloacid Dehalogenase 325 652 - -
Bva01g00656 966 Gene3D - 916 966 - -
Bva01g00656 966 Gene3D - 134 229 - -
Bva01g00656 966 SUPERFAMILY HAD-like 339 648 IPR036412 -
Bva01g00656 966 SUPERFAMILY Calcium ATPase, transduction domain A 134 242 IPR008250 -
Bva01g00656 966 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Bva01g00656 966 Pfam haloacid dehalogenase-like hydrolase 339 615 - -
Bva01g00656 966 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 864 IPR023298 -
Bva01g00656 966 PRINTS H+-transporting ATPase (proton pump) signature 632 657 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 PRINTS H+-transporting ATPase (proton pump) signature 459 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 PRINTS H+-transporting ATPase (proton pump) signature 601 617 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 PRINTS H+-transporting ATPase (proton pump) signature 781 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 PRINTS H+-transporting ATPase (proton pump) signature 573 589 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 826 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva01g00656 966 PRINTS P-type cation-transporting ATPase superfamily signature 601 620 - -
Bva01g00656 966 PRINTS P-type cation-transporting ATPase superfamily signature 497 508 - -
Bva01g00656 966 PRINTS P-type cation-transporting ATPase superfamily signature 343 357 - -
Bva01g00656 966 PRINTS P-type cation-transporting ATPase superfamily signature 519 529 - -
Bva01g00656 966 PRINTS P-type cation-transporting ATPase superfamily signature 624 636 - -
Bva01g00656 966 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Bva01g00656 966 Gene3D - 355 502 IPR023299 GO:0000166
Bva01g00656 966 Pfam E1-E2 ATPase 132 322 - -
Bva01g00656 966 ProSitePatterns E1-E2 ATPases phosphorylation site. 345 351 IPR018303 -
Bva01g00656 966 PANTHER CALCIUM-TRANSPORTING ATPASE 4 946 - -
Bva01g00656 966 Gene3D - 340 638 IPR023214 -
Bva01g00656 966 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 235 364 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 576 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00656 966 Gene3D - 96 832 - -
Bva01g00656 966 Coils Coil 917 937 - -
Bva01g00656 966 CDD P-type_ATPase_H 36 862 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva01g00656 966 PANTHER PLASMA MEMBRANE ATPASE 4 946 - -
Bva01g00656 966 SFLD p-type atpase 325 652 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00656 Bva-Chr1 4802423 4809170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00656 1 966 Primary Pumps ATPases AT5G62670 76.955 0.0 1481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00656 K01535 - gmx:100794938 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00656 01 4802423 4809170 Bva01g00656 01 4802423 4809170 ECH