Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00655 ATGATTCAAGAGAGCATTAATCTTGAGTCTGATCTGGCTCTTCTTGAATCCATTCAACGGTTTCTCCTCAATGAAGACTCCGATCTTCTCACGGCGTTTCCGGCTTGGTGCCAGAGTTTAAGCTCTGATCTAACCGACGATGGAATCCAATCACAGTCAAACCTGAGTACCCCAGATGATGTGGCACTCTACAATGTCTATCCTAACGCCGTTAACTCTCCATCCGTTTCATCAGAACGGGCGACCGCGTCCGCATCTTCTGAAGATGTGTACAGCGCGATAAACGAGTTTGATGCGGCGGCAAGTGAAGCGAACGCGCCACTGTGTTGGAGGAGCTGTCATGGAAGCCTAAATGATAACATCCAAAATATTGCATACAATGCCGTTGATTCTCCACTCGTTTCCCAACAAGTCAGGACGGGTACAGTGGCTGCGGCAGCGCGTGAAAGCCACGCACAAGAAAGCTGGAGACAATACAGAGGAGTGAGGCGTAGGCCATGGGGGAAATACGCGGCTGAGATTAGGGACCCGAAGAGGAACGGTTCCAGGCTATGGCTTGGGACTTACGAGATGGCTGAGGATGCGGCTTTGGCTTACGACCTAGCCGCTTTCGAGATCCGTGGCTCAAAAGCCAAGCTAAATTTTCCGCATCTTATTGGGTCCAATATATCGGAACCAGTCAGAGTGACGGCGAAGCGCTACTCACCGGAGCCTTCTTCGACGTCAGAACTGAGTCAACTGAAACGGAGAAAGAGCCGAGATAGTTCTTA 770 0.5065 MIQESINLESDLALLESIQRFLLNEDSDLLTAFPAWCQSLSSDLTDDGIQSQSNLSTPDDVALYNVYPNAVNSPSVSSERATASASSEDVYSAINEFDAAASEANAPLCWRSCHGSLNDNIQNIAYNAVDSPLVSQQVRTGTVAAAARESHAQESWRQYRGVRRRPWGKYAAEIRDPKRNGSRLWLGTYEMAEDAALAYDLAAFEIRGSKAKLNFPHLIGSNISEPVRVTAKRYSPEPSSTSELSQLKRRKSRDSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00655 256 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 10 248 - -
Bva01g00655 256 Gene3D AP2/ERF domain 157 217 IPR036955 GO:0003700|GO:0006355
Bva01g00655 256 Pfam AP2 domain 158 208 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 PANTHER DNA-BINDING DOMAIN 10 248 IPR044808 GO:0003700|GO:0009873
Bva01g00655 256 MobiDBLite consensus disorder prediction 230 256 - -
Bva01g00655 256 CDD AP2 158 218 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 PRINTS Ethylene responsive element binding protein signature 198 218 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Bva01g00655 256 SUPERFAMILY DNA-binding domain 158 217 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00655 Bva-Chr1 4796504 4797470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00655 132 252 AP2-EREBP Transcription Factor Family AT2G44840 60.656 1.54e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva01g00655 AP2 9.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00655 K09286 - cit:107175663 156.377