Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00653 ATGATTCAAGAGAGCATTAATCTTGAGTCTGATCTGGCTCTTCTTGAATCCATTCAACGGTTTCTCCTCAATGAAGACTCCGATCTTCTCACGGCGTTTCCGGCTTGGTGCCAGAGTTTAAGCTCTGATCTAACCGACAATGCAATCCAATCACAGTCAAACCTGAGTACCCCAGATGATGTGGCACTCTACAATGTCTATCCTAACGCCGTTAACTCTCCATCCGTTTCATCAGAACGGGCGACCGCTTCCGCATCTTCTGAAGATGTGTACAGCGCGATAAACGAGTTTGATGCGGCGGCAAGTGAAGCGAACCCGCCTCTGTGTTGGAGGAGCTGTCATGGAAGCCTAAATGATAACATCCAAAATATTGCATACAATGCCGTTGATTCTCCACTCGTTTCCCAACAAGCCAGGACTGGTACAGTGGTTGCGGCAGCGCGTGAAAGCCACGCACAAGAAAGCCGGAGACAATACAGGGGAGTGAGGCGTAGGCCATGGGGGAAATACGCTGCTGAGATTAGGGACCCGAAGCGGAACGGTTCCAGGGTATGGCTTGGGACTTACGAGACGGCTGAGGATGCGGCTTTGGCTTACGACCGAGCAGCTTTCGAGATGCGCGGCTCAAAAGCCAAGCTAAATTTTCCGCATCTTATTGGGTCGAATATATCGGAACCAGTCAGAGTGACGGCGAAGCGCTGCTCCCCGGAGCCTTCTTCGACGTCAGAACTGAGTCAACTGAAACGGAGAAAGAGCCGAGATAGTTCTTA 770 0.5104 MIQESINLESDLALLESIQRFLLNEDSDLLTAFPAWCQSLSSDLTDNAIQSQSNLSTPDDVALYNVYPNAVNSPSVSSERATASASSEDVYSAINEFDAAASEANPPLCWRSCHGSLNDNIQNIAYNAVDSPLVSQQARTGTVVAAARESHAQESRRQYRGVRRRPWGKYAAEIRDPKRNGSRVWLGTYETAEDAALAYDRAAFEMRGSKAKLNFPHLIGSNISEPVRVTAKRCSPEPSSTSELSQLKRRKSRDSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00653 256 CDD AP2 166 218 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 SUPERFAMILY DNA-binding domain 158 217 IPR016177 GO:0003677
Bva01g00653 256 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 94 238 - -
Bva01g00653 256 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 Pfam AP2 domain 158 208 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 PANTHER DNA-BINDING DOMAIN 94 238 IPR044808 GO:0003700|GO:0009873
Bva01g00653 256 MobiDBLite consensus disorder prediction 228 256 - -
Bva01g00653 256 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Bva01g00653 256 Gene3D AP2/ERF domain 157 217 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00653 Bva-Chr1 4779101 4780043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00653 132 252 AP2-EREBP Transcription Factor Family AT2G44840 62.295 2.61e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva01g00653 AP2 6.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00653 K09286 - cit:107175663 167.162