Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00647 ATGTACGGAAGGTACACGCAACAACTTTCCAATCTCGATGATTCGGATCATCGGACGACGACGTCGTGTCAAGATGTTTCTACAGTTTATACCGAGAGTTCATGCTTCCAAAACGTTTTCTTAACGGAGAGCTGGAGTACTGAGCTGCCGTTTAAGGAAAACGACGCCGAAGATATAGTTATCCACAGCATTTTGAGTGAGGCCGTCAGCACTGGATGGCTTCCCTCAAATGATTCtgcaaagaagataaaaatggAGTCCATGAACGAAGAGAATGATTTTGACACGGTGGCGAGTGGGTGTCACGCTCCGAGGGATGAGAGGAGGAGTTACGGAGGTGTGAGGAGGAGGCCTTGGGGGAAGTACGGGGCAGAGATTAGGGATCCCAAGAAGAACGGCGTTAGGTTGTGGCTTGGGATTTACGAGACGGCTGAGGATGCGGCTTTGGCTTATGACCAAGCCGCGTTCAAGATGCGTGGCTCTAAAGCTAAGCTGAATTTCCCTCACTTGAATGGCTCAGGTCACGCGGGGCCTGTTACATCCACTATAAAGAGGCGGTCGTCGGAGCTGGGTTTCTCTGGCTTGTCATATTCGTTCGGAAATGCGACGGGGAAGCCGAGCAAGAATAGCGCCGCCGTGCTGGATTCCAGTTCCATGGATGGGCTGcccaatta 674 0.4985 MYGRYTQQLSNLDDSDHRTTTSCQDVSTVYTESSCFQNVFLTESWSTELPFKENDAEDIVIHSILSEAVSTGWLPSNDSAKKIKMESMNEENDFDTVASGCHAPRDERRSYGGVRRRPWGKYGAEIRDPKKNGVRLWLGIYETAEDAALAYDQAAFKMRGSKAKLNFPHLNGSGHAGPVTSTIKRRSSELGFSGLSYSFGNATGKPSKNSAAVLDSSSMDGLPN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00647 224 PRINTS Ethylene responsive element binding protein signature 150 170 IPR001471 GO:0003700|GO:0006355
Bva01g00647 224 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Bva01g00647 224 SUPERFAMILY DNA-binding domain 111 169 IPR016177 GO:0003677
Bva01g00647 224 MobiDBLite consensus disorder prediction 1 20 - -
Bva01g00647 224 PANTHER DNA-BINDING DOMAIN 28 206 IPR044808 GO:0003700|GO:0009873
Bva01g00647 224 MobiDBLite consensus disorder prediction 204 224 - -
Bva01g00647 224 Gene3D AP2/ERF domain 110 169 IPR036955 GO:0003700|GO:0006355
Bva01g00647 224 ProSiteProfiles AP2/ERF domain profile. 110 168 IPR001471 GO:0003700|GO:0006355
Bva01g00647 224 CDD AP2 111 170 IPR001471 GO:0003700|GO:0006355
Bva01g00647 224 Pfam AP2 domain 111 160 IPR001471 GO:0003700|GO:0006355
Bva01g00647 224 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 28 206 - -
Bva01g00647 224 SMART rav1_2 110 174 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00647 Bva-Chr1 4757597 4758271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00647 27 193 AP2-EREBP Transcription Factor Family AT2G44840 54.167 6.47e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva01g00647 AP2 2e-11 CL0081