Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00644 ATGTTTGGACTCAACCATACCGATTCTGCTGCTCTAGAAGCAATCAGGCAACATCTTCTAGGCGATGAAGTCCATGTCCAAACAACTTCCTCTGATAATGCCGCGATGTTTAGCCAGAACGAGAACTGCGGCGAGGTGGCTAGAAAACCTGACATGACGCGAAACGACACCGTCTACGCCCATTCAGGTAGATGTAAGGTCATCACCTGGGATTTTTGTGATAGTGTGGTCCGAATGCGGGAGGAAGCAATGGTGGAGCGTGGGTGCAACGCGCAACCGTATGAGCGGCATTACCGGGGCATAAGGCGGCGGCCTTGGGGGAAATGTGCGGCGGAGATAAGAGATCCAATGAAGAATGGGGCTAGAACATGGCTTGGGACTTATGACACAGCCGAGGAAGCGGCTCTGGCTTATGACCGAGCTGCTTTTAAGATGCGCGGAGCCAAAGCCAAGCTTAATTTCCCTCACCTCATTGGCTCCAACGAGTGGAAGCCAATTCCAGTGGCTCGGAATGGCTGTGAAACTGTGAGTGGGATTGACGAGCATTCTCCAAAGCTTAAGCGTAGGAAGAGCGACAACGAGGCCTATGTAACTGTTTATTA 602 0.5166 MFGLNHTDSAALEAIRQHLLGDEVHVQTTSSDNAAMFSQNENCGEVARKPDMTRNDTVYAHSGRCKVITWDFCDSVVRMREEAMVERGCNAQPYERHYRGIRRRPWGKCAAEIRDPMKNGARTWLGTYDTAEEAALAYDRAAFKMRGAKAKLNFPHLIGSNEWKPIPVARNGCETVSGIDEHSPKLKRRKSDNEAYVTVY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00644 200 CDD AP2 97 157 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 PANTHER DNA-BINDING DOMAIN 45 170 IPR044808 GO:0003700|GO:0009873
Bva01g00644 200 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 SUPERFAMILY DNA-binding domain 97 156 IPR016177 GO:0003677
Bva01g00644 200 PRINTS Ethylene responsive element binding protein signature 137 157 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 45 170 - -
Bva01g00644 200 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Bva01g00644 200 Gene3D AP2/ERF domain 96 156 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00644 Bva-Chr1 4745929 4746531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00644 97 166 AP2-EREBP Transcription Factor Family AT2G44840 75.714 3.55e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva01g00644 AP2 3.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00644 K09286 - fve:101293051 147.902