Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00640 ATGGTTATAGGGATGCCAGGGATGATTAGAAAGAGACCGTGGCGACTCTTCCGTACACAATCCTACTCGTCATTTCGATGgATCTTCTTATCTAGAAGCCTTTATGTGatgatatatgatatttgGGACATGGAGAGGGTTCCAGAGCCAAAGATACTTCCTCGGATGTTGCCTGTCCTAGTAGAGGTATCAAATGCACACACTACTGCAGTAAGAGAAGGTGGTCACAGACCAAATTCACAGGAAGTTTCAAGTGTGCGTGAGATTTCAGCTAGGGAAGTGCATCAGTTGTCAAAAGCACGGGATGGGCCTATCACTCGTCTGGCCACCATAAGAGAATTGGCACAATTATCCAATGCACGCATAGTTTTGGTAAGAGAAGATATGGGATTTGATACACGAGCTACTCAAGAATCTGTCTCCCCTGCACCTGCAAGAACATGGAAAGGAAAGGCTTCTTTGCCAGAACCAGAAGAACTCATGCCTGATGATGAGACTTTGAAAGGAAGCAGCGACTCATTTGAGGAAGGTGGTCCAAGTTCATTTGCTGGTGCCAGTCATCCCCCAGAACCCATTGATACGGATCTGATGCGAACTGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGATGCTTAATGAAGAGCATGTCAATGAAGGGTCCTTTCCTAGAAGATCTCTCAATACGGGTTCCCACTAAAAAACCAAGCCCAGCTGTTGTTTCCCCTGCAGAAAGCCTGGTTGAAGAACCAAATGATGTGGGACCATTGTCCTCACCATTTTCAGGTCGTGCATCTCAAAATACGGAGAACTCTCTTCTTCCCCCAGATTCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCCAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTAGTGGTGTTGTCACAGCAATGAGCATAGTTAATAGTTGTGCCAGTACATACCGGAGTGATGCAATCACAAGTGATGGCATGCTTAGTATAGAAAGGAACTGTGATAGTACAAAAGGAAGTGTGAGGGGGGATTCACTTGAAAGCACAAAAACTAGTGCTAGTAGAGCAAGTGATAGCAGTGGTCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTCGGTGGAAGGCTATCCTTGCTATCCGAGCACGAGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCCTCCCTAGCAAGCAGAAAAAAGCTGACGAGGGCACAGACAGAAAGGGAGATTTTGCAGCTGCTGGATCATCCCTTTTTGCCAACCTTGTATACTCATTTTGAGACTGACAGGTTCTCCTGTTTGGTAATGGAATACTGCCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGAAAACATTTCTCAGAATATGCTGCTCGATTTTATGCTGCGGAGGTCCTGTTGGCTCTTGAATATCTTCATATGCTTGGAGTTGTCTATCGAGACCTTAAGCCTGAAAATGTGCTGGTCCGAGATGATGGCCACATAATGCTTTCAGACTTCGATCTTTCCCTTAGATGTGCTGTGTCACCAACACTGATTAGAACCTCCTATGATGGCGACCCTTCAAAACGGGGTGGTGGTGCATTCTGTGTCCAGCCTGCATGCATGGAGCCCACATCAGCTTGCATACAACCTGCCTGTTTCATTCCTAGGATCTTCCCACAGAAAAACAAGAAGTCAAGAAAGCCTCGAGCTGAACCTGGGATGCCATCCAGCACACTTCCAGAGCTTGTTGCGGAGCCTACTGCAGCTCGGTCTATGTCCTTTGTAGGAACCCATGAATATCTTGCGCCTGAAATTATTAAAGGAGAAGGTCATGGCAGTGCAGTGGATTGGTGGACATTTGGAATTTTCTTGCATGAACTACTATACGGTAAAACCCCTTTCAAAGGATCAGGTAACCGTGCTACACTGTTCAATGTGGTAGGCCAGCAGCTCAGATTTCCAGAATCACCAGCAACCAGTTATGCCAGCAGAGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCACAGCACCGCCTTGGGGTGAAGAGAGGTGCAACTGAGATCAAGCAGCACCCTTTCTTTGAAGGTGTGAACTGGGCTTTGATTAGGTGTAGCACGCCACCGGAAGTTCCAAGACCAGTGGAGGCCGAGCTGCCCGGAAAGTTTGGAGCAGTGGACCCTGTTGGGGTTGGCATCGGTAGTAAAAGGATGGTAGGCACGGTAGGTACTGACATGACGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTCTA 2417 0.4655 MVIGMPGMIRKRPWRLFRTQSYSSFRWIFLSRSLYVMIYDIWDMERVPEPKILPRMLPVLVEVSNAHTTAVREGGHRPNSQEVSSVREISAREVHQLSKARDGPITRLATIRELAQLSNARIVLVREDMGFDTRATQESVSPAPARTWKGKASLPEPEELMPDDETLKGSSDSFEEGGPSSFAGASHPPEPIDTDLMRTVYVPIGQNKSEAGCLMKSMSMKGPFLEDLSIRVPTKKPSPAVVSPAESLVEEPNDVGPLSSPFSGRASQNTENSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDAITSDGMLSIERNCDSTKGSVRGDSLESTKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRGGGAFCVQPACMEPTSACIQPACFIPRIFPQKNKKSRKPRAEPGMPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPGKFGAVDPVGVGIGSKRMVGTVGTDMTKSGGKYLDFEFF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00640 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Bva01g00640 805 MobiDBLite consensus disorder prediction 134 191 - -
Bva01g00640 805 MobiDBLite consensus disorder prediction 235 278 - -
Bva01g00640 805 ProSiteProfiles Protein kinase domain profile. 408 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00640 805 Gene3D Phosphorylase Kinase; domain 1 406 491 - -
Bva01g00640 805 MobiDBLite consensus disorder prediction 337 381 - -
Bva01g00640 805 Gene3D Transferase(Phosphotransferase) domain 1 492 560 - -
Bva01g00640 805 PANTHER FLIPPASE KINASE 1-RELATED 113 805 - -
Bva01g00640 805 MobiDBLite consensus disorder prediction 152 171 - -
Bva01g00640 805 MobiDBLite consensus disorder prediction 260 275 - -
Bva01g00640 805 SUPERFAMILY Protein kinase-like (PK-like) 390 761 IPR011009 -
Bva01g00640 805 Pfam Protein kinase domain 409 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00640 805 Pfam Protein kinase domain 638 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00640 805 Gene3D Transferase(Phosphotransferase) domain 1 637 758 - -
Bva01g00640 805 MobiDBLite consensus disorder prediction 337 385 - -
Bva01g00640 805 CDD STKc_phototropin_like 406 764 - -
Bva01g00640 805 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 113 805 - -
Bva01g00640 805 SMART serkin_6 408 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00640 Bva-Chr1 4719176 4724248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00640 41 805 AGC Kinase Gene Family AT2G44830 69.027 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva01g00640 Pkinase 1.3e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01559 02 18516997 18522991 Bva01g00640 01 4719176 4724248 BWGD
Bva01g00640 01 4719176 4724248 Bva01g00640 01 4719176 4724248 ECH