Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00621 ATGGAAGGAACAGAGAGAGAAGTTCCCAATTACGAGCTTCAAGTTTCCTTCTCAGGCACCCCACAAGCCATCCATGAAATGGGTTTTGTACAATTTGAAGAAAACCAGGTACTCAGCTTCTTGGCAGTGGCACCTACATCACAATCTCAATCTTCTCATTTATCTCAGTCGCTAAATGGCGGCACCAGCAGGTCCACCACTGCCACGGCCGGCCCGGAAACTAATGCACCACCGGCTGCTACCGCCGTGGGGTTTCGTCATAACGACCCTGTGGCCAGAGCTTCTTGGAATAACGAACAGGTGGGAACTCTCGATCCTAAAGCTATCAACGATGAAAATTGTACTGGAAATGCTAGTGACGGCAACAATACGTGGTGGAGAAGTGCAGCCTCAGAGAAAAGCAAGGCAAAAGTGAGAAGGAAGCTAAGAGAGCCAAGGTTTTGCTTCCAAACTAGAAGTGATATCGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAagGAGTTACTATCGCTGCACCCATAGCAACTGTAGGGTGAAGAAGAGGGTTGAACGACTATCTGAGGATTGTCGTATGGTGATAACTACATATGAAGGTAGACACAACCACTCTCCTTGCGACGACTCAAATTCATCTGAACATGAAGGCTTCACTTCATTCTG 698 0.4656 MEGTEREVPNYELQVSFSGTPQAIHEMGFVQFEENQVLSFLAVAPTSQSQSSHLSQSLNGGTSRSTTATAGPETNAPPAATAVGFRHNDPVARASWNNEQVGTLDPKAINDENCTGNASDGNNTWWRSAASEKSKAKVRRKLREPRFCFQTRSDIDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEGFTSF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00621 232 MobiDBLite consensus disorder prediction 51 74 - -
Bva01g00621 232 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 15 229 - -
Bva01g00621 232 SUPERFAMILY WRKY DNA-binding domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva01g00621 232 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva01g00621 232 ProSiteProfiles WRKY domain profile. 153 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva01g00621 232 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 229 IPR044810 GO:0003700
Bva01g00621 232 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva01g00621 232 Gene3D WRKY domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva01g00621 232 MobiDBLite consensus disorder prediction 213 232 - -
Bva01g00621 232 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00621 Bva-Chr1 4586791 4592933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00621 1 232 WRKY Transcription Factor Family AT2G44745 53.527 2.23e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva01g00621 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00621 - - gmx:100800671 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01539 02 18348607 18353915 Bva01g00621 01 4586791 4592933 BWGD
Bva01g00621 01 4586791 4592933 Bva01g00621 01 4586791 4592933 ECH