Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00610 ATGGCTTCCCCTTCTTCTTCCCCTATACACTCTACGCCAACGGCTGATCCACCCTCCGCCGTTCCCCTCCCTCTCCCGGCCCCACCCTCCTCTCGTCGCCTTCCACCGCCGTGCTGGTCCAACGATGAGACCGTGGCCCTCATCGATGCTTACCGTGACAAGTGGTACTCCCTCGGTCGTGGCAATCTAAAGGCTACCCACTGGCAAGAGGTCGCCGATGCCATTACTCACCGCTGCCCCAACGCATCCCCGGTTAAAACTGCCGTCCAGTGCCGCCACAAGATGGAGAAACTGTG 296 0.6081 MASPSSSPIHSTPTADPPSAVPLPLPAPPSSRRLPPPCWSNDETVALIDAYRDKWYSLGRGNLKATHWQEVADAITHRCPNASPVKTAVQCRHKMEKL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00610 98 Gene3D - 39 98 - -
Bva01g00610 98 CDD SANT 39 98 IPR001005 -
Bva01g00610 98 MobiDBLite consensus disorder prediction 15 35 - -
Bva01g00610 98 MobiDBLite consensus disorder prediction 1 37 - -
Bva01g00610 98 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 98 IPR044823 -
Bva01g00610 98 Pfam Myb/SANT-like DNA-binding domain 37 98 IPR044822 -
Bva01g00610 98 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 5 98 - -
Bva01g00610 98 ProSiteProfiles Myb-like domain profile. 39 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00610 Bva-Chr1 4522182 4522478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00610 38 96 Trihelix Transcription Factor Family AT3G14180 40.678 1.68e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva01g00610 Myb_DNA-bind_4 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00610 - - vun:114179736 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00610 01 4522182 4522478 Bva01g00610 01 4522182 4522478 ECH