Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00606 ATGAgAGCGGGAGCCAGCAACGCTTTTGATCTTTCAAATTTTCGAGTTCATATCTGGGGTCTGAGGAGTTTGTCTGTTATCTCAATCATGGCTACTAGGCTTATGTTTGAGAACTCTTGTGACGTTGGGGTGTTTTCAAAACTTACCAACGCCTATTGTTTGGTAGCTATTGGAGGTTCTGAAAGCTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTTAAGACCTCCATTGGTGGTACTAGGATTATTGGTCGCCTTTGTGttggaaACAAGAACGGGCTTCTCTTGCCACACACTACCACTGACCAAGAGCTTCAACATTTGAGAAACAGTCTCCCTGATAAAGTGGTTGTTCAGCgcatagaagaaaaattgtctGCGCTAGGAAATTGTATTGCTTGCAATGATCATGTTGCCCTTGCACACACTGATCTTGACAAGgAGACAGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACTATTGCTGGCAATATTCTCGTCGGCAGTTACTGCGCCTTTTCCAACAGAGGTGGTTTGGTCCACCCCCATACTTCCATCGAAGACTTGGATGAACTCTCTACACTTCTCCAGGTTCCTTTGGTGGCCGGAACTGTGAATCGCGGCAGTGAAGTCATAGGTGCCGGCATGGTAGTTAATGATTGGATTGCCTTCTGCGGGTCGGACACCACAGCAACAGAACTCTCCGTGGTTGAAAGTGTTTTCAAGTTGAGGGAATCCCAACCTAATGCCATTGTTGATGAGATGAGGAAATCACTGATTGATAGCTATGTTTG 824 0.443 MRAGASNAFDLSNFRVHIWGLRSLSVISIMATRLMFENSCDVGVFSKLTNAYCLVAIGGSESFYSAFEAELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDKVVVQRIEEKLSALGNCIACNDHVALAHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGMVVNDWIAFCGSDTTATELSVVESVFKLRESQPNAIVDEMRKSLIDSYV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00606 274 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 30 274 - -
Bva01g00606 274 SMART eIF6neu2 32 233 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 TIGRFAM eIF-6: putative translation initiation factor eIF-6 33 253 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 SUPERFAMILY Pentein 30 253 - -
Bva01g00606 274 Gene3D - 30 254 - -
Bva01g00606 274 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 30 274 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 PIRSF Transl_init_IF-6 30 255 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 Hamap Translation initiation factor 6 [eif6]. 19 274 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 Pfam eIF-6 family 33 232 IPR002769 GO:0042256|GO:0043022
Bva01g00606 274 CDD IF6 31 252 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00606 Bva-Chr1 4497314 4500952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00606 30 274 Eukaryotic Initiation Factors Gene Family AT3G55620 88.163 1.06e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00606 K03264 - cit:102622866 464.536