Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00597 ATGTCCTTCAATCAATCAAGGTCCGATAAGAAGGACACTCAATATCGAAAATCTAAGCGATCCGTGAGCTCCAATCAACAGCGAGGTTCCTCGGGCGTGTATGTTAAGGGAGGCGGCGGACCCACGCCTTCACCGTCGATCACCTTGGGTTCATCACTTCCGTCTAACCGGAGttttaagaaTACTAATAATGCACGAGGAGGGCAATATAGGGCGATTCCATCCACTCTGAATTCAACCGAGTCTACTAGTGCTTCTATGACCCGGACTATACAGAATGGTACACATGTACAGCCACAATTACATGGAGCATCTGATGCGGTAGTTACAAATGCAACTGCCACTGGAGATGCATCCAAGGCATTCCCTCTGCAATTTGGAACTCTCAGTCCCGGTTTTGTGAATGGGATGGCAATACCTGCTCGTACCAGTTCAGCTCCGCCTAATTTGGATGAGCAGAAACGTCATCAGGCACGTAATGAGTCTTATAGACCTGTATTACCTTCAGTGCCTGTTCCCAAACAGCAGCAACCAAGGAAGGATGCGGGTGTCTCTGGGGAGGCCAATTCAGGGACAAGGGCCAAAAAGGATCCTCAGGTGCAGAAGCCTTTTGTTGTCCCAATGACTGGGATTTCAATGCCCATACCTTTCCACCAATCACAGGGTCAGATGCCTATACCCATGGGAAATGCCCCGCAAGTGCAACAGCAGGTTTTTCTTCCTCGGTTTCAACCCAATCTATTCGTGCATCAAGGCCAAAACATGAATTTCACTCCTCAAATGGGTCCTCGATTAACCAACATGGGTATGGGTCCTCGTAAAACTACTGTTAAGATAACTCATCCTGAGACACGCGAGGAGCTGAGGCTGGACAAAAGAGCTGATGCATATTCAGAGGGGGGTTCATTAGGTTCCAGGCCTCATCCTAATGTACCTTCTCAATCCCTACCGGTTCAGTCATTTGCAGCTTCTCATCCCATCAACTACTATCCGCCTGGCTCCTACAATACCAGCTCCCTGTTTTTCCAATCTTCTCTTCCCTTAACAAGTAGCCAGATAGCTTCAAATTCTCAGCCACCGAGATTTAACTATCCAATGAACCATGGCCCCCAAAATGTGCGTTTTGGTAATCCGTCTTCTCTTAGTACTGTGCCTGTTGGAAAAACTGGCACTCAAACTCTTGGTGTTCTTGAACCACCTAATCCAGAACCTTCTCGTGATGTGCATAATGCGATCTCATCATCTCCATTGGGAGTAAGTTCTGTTGCTGAGAAAAGTGAATTTCCTAGTTCTTCGGGAGCATCTAGTGATGCTACCTCCTTTGTGCCGCAAAATTTCTCTGAAACACCGGCTGAAATCTCTTCACTACAATTTAAGTCATCTAGTGATTTTTCAGCTTCAAGACCATTACCAAAACTATCTGCAACAGTATCTGTTGAGAACTGTGCAGCTTCCACCTCTTTGTCTGCTACCAGTGCTGTTAGTGAAGATACTGTTTTGGCTGGGTCCAACAATGAAGGCATGCAGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAAACAGAAGAAACCCGAGAAGAAAGGTCAATCACAACATCAGTCTCAAGCGGTGGCAAGTGTATCTTCTGGATCTGATGGCGGTGTAGCTGATAGGGGAGTCTCTGAAACTTTAAAAACTACAGCAAACCATTCTGCTGCCATGTGTAGTGATGATGTCCCAGCAACTCCAGACATGCCATTATCCACTGGCGGTACTGTTCCTAGTGCTATTGAAGCCAAGGATAACTATTCCAAGGAAATGCCCGGTGCTCAATCTGTTGATAGTTTGAATGATCAGAAGCATGATAAGCTGGAGAAATTGTCACAAGATGATAAGCTTCTAGACCAGAATATACTGGAAACGAGTGATAAAAATGATAGAAGACCTTCTGAATGttctcaacaaaatttaaacgaTAGTGGCTCATCTGTAGAATCTGTTTCCTCGAAATCCACCAAATGTGAACAACCCGAAGATGCTGCAAAAATAAGGGATGAAGTCCTAATCTCAAGGACTGTACAACAAAGACAGGAAGAGTCTAGGAGTGGCAGTGCAGAATGTGACAAGATTGGAGATAAGTTAGGCATGTCTATATCCCCTGCATTGGATTCTAGAGATGCAACCTCTTTGAGTAGAAATGCTAGTGTAGTTAATGGTGAATCTGTTATTGCATATTCTGGCTCATTGGACCAGCAATCTGCTTCTGCTGGGAGTGGGTCGGTGTATCTTCCACTGTCAGATACCAATGATAAACCTATTTTAGAACCAAATAAGGTAAAAGCAACTTCTAAaggcaagaagaaaatgagagaaatcCTTCAGAAAGCAGATGCTGCTGGGTCAACATCTGATCTCTATAATGCATATAAGGGACctgaggaaaagaaagaagctatTGTAAGTTCAGATAGTAGTGAAAGTACGTCTAGTTCTGACAGTTCAACGCAGTTACTTAAAGATGCTCCTCAGCTTGATGCTGTCACAAGTGAGAAAGGTGGACAAAGGAAAGTGGAGCCTGATGATTGGGAAGATGCTGCTGACATGTCCACACCAAAATTGGAAGTTTCAGATAAAATGCAACAACTTAGTGAGGGGAATGGGAGTACAGTCAAAAAATACTCTagagattttcttttgaaattggCTGAGCAATGCACTGGTCTTCCGGAGGGATTTGAAATCAGAATAGACACTGCTGTAGCTTTGATGAGTTCTAGTATTAGTGGTTCTCTTGCCATTGAACATGATCCACATCCTAGTCCAGGAAGAATTGATAGGTCAAGTGGGGTGTCTCGAATGGACCGTCGTGGAAGTGGTGTGGTTGAGGAAGACAGATGGAGTAAGGTTCCAGGGGCTTTTATTTCAGGATTTCGACCTAGTCCAGGAGGCAATTTTGGTGTTTTAAGGAGCCCACACCCACAAACCCCTGTGCAATATTCTGGAGGGATCCTTGCTGGGCCAATGCAATCCATGGGACCTCAGGGAGGAATGCAAAGAAATGATGGTGAAAGGTGGCAGCGAGGTAGTAGCTTCCAGCAAAGGGGTTTAATTCCTTATCCTTCTCAGACTCCTTTACAGATGATGCATAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAAGCTATCCTAAACAAGCTAACTCCTCAGAATTTTGACAAACTTTTTGAGCAGGTTAAAGCAGTTAACATTGACAATGCTGTCGGCCTTACGGGTGTCATATCGCAGATCTTTGAGAAGGCTTTGATGGAGCCTACTTTTTGTGAAATGTATGCCAATTTCTGCCTACTTTTGGCTTCAGAGTTGCCTGATTTCAGTGAGGACAATGAGAAGATAACTTTTAAGAGATTACTATTGAACAAGTGCCAGGAGGAATTTGAGAGAGGTGAAAGAGAGCAAGAAGAAGCTAATAAGATTGATGAGGGTGAGGTTGAGCAGTCTGCTGTGAAgagggaagagaaaagagtTAAAGCACGAAGACGCATGTTGGGTAATATTAGATTGATCGGCGAGctatataagaagaaaatgttgacAGAGAGAATAATGCACGAGTGTATAAGGAAGTTACTGGGTCAATACGAGGATCCTGATGAAGAAGATGTTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACACATGGattcatattttgaaagaatgaaattgttatctaataatatgaatttttcttctagaGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGACGCTGCCCAAGAAAGGCAGCTACAAACTGGTAGGTTGGGTCGTGGTCCCAGCAGTAATACATCGGGGAGAAGAATGCCTATGGATTTTGGTTCAAGAGGGTCGTATGTGTGGTCTTCTCCAAACTCTCAGATGGGTGGAATGCGAGGGCCCCCTACTCAAGTTCGTGGCATTGGTTATCAGGATGTTCGTTTTGATGATAGGCAATCTTATGAGGCTAGGACCTTGTCAATTCCCTTGCCTCAAAGACCACTAGGTGATGACTCTATCACCTTGGGGCCCCAAGGTGGTCTTGCAAGAGGAATATCCATAAGAGGAGCAACTGCAATTTCAAACCCACCTGTTTCTGATGTTACTCCTGACCCTGGAGACTCTCGAAGAATTACTACCAGTCTTAATGGTTATGGTCAATTTTCAGAACGCGGACCGACGAACTCAAGGGAAGATCATATGCCAAGATATGTTCCCGATAGATTTGCAGGCCCAGCTGCTTATGAGCAATCAGGTGCTCAAGAATGTAATATGAATTATGGTAACAGAGACTTGAGAAATGCGGATAGGAGCTTGGACAGGCCTGTTGCAACTTCACCTGCACGAGTGCAAGGACCAACAGTTTCCCAGAATGCTTCTTCAGAGGTTTGGCCTGAAGAACGACTGCGGGACATGTCCATTGCAgcaattaaagaattttacagTGCTAGAGATGAGAAAGAAGTTGCTTTATGTGTGAGAGATTTAAACTCTCCGAGCTTCCATCCTACCATGGTTTCTCTCTGGGTTACCCAGTCTTTCGAGAGGAAGGACGCAGAAAGGGATCTCTTGGCCAAATTGCTTGTCAACCTTACTAAGTCTCAGGATGGCACCTTGAGTCAAGCTGAGCTCATCAGAGGGTTTGAATCTGTTCTGAGTACATTGGAGGATGCTGTTAACGATGCACCCAAAGCAGCAGAATTTCTTGGCCGGATATTTTTCAAAGTTATAACTGAGAATGTGGTGTCTCTGAAAGAGATTGGGCAACTAATACATGAAGGTGGAGAGGAGCCAGGCCAGCTCTTAAAAGTTGGACTTGCAGGTGATGTCGTTGGAAGCACATTGGAGGCAATACAATTGGAGAAGGGGGATGCTATTCTAAATGAGATCTGCAAGAGTTCCAACATAAAGTTGGAATCTTTCCGGCCACCTGATCCTATTAAATCAAGCAAGttagagaaatttattta 5129 0.4295 MSFNQSRSDKKDTQYRKSKRSVSSNQQRGSSGVYVKGGGGPTPSPSITLGSSLPSNRSFKNTNNARGGQYRAIPSTLNSTESTSASMTRTIQNGTHVQPQLHGASDAVVTNATATGDASKAFPLQFGTLSPGFVNGMAIPARTSSAPPNLDEQKRHQARNESYRPVLPSVPVPKQQQPRKDAGVSGEANSGTRAKKDPQVQKPFVVPMTGISMPIPFHQSQGQMPIPMGNAPQVQQQVFLPRFQPNLFVHQGQNMNFTPQMGPRLTNMGMGPRKTTVKITHPETREELRLDKRADAYSEGGSLGSRPHPNVPSQSLPVQSFAASHPINYYPPGSYNTSSLFFQSSLPLTSSQIASNSQPPRFNYPMNHGPQNVRFGNPSSLSTVPVGKTGTQTLGVLEPPNPEPSRDVHNAISSSPLGVSSVAEKSEFPSSSGASSDATSFVPQNFSETPAEISSLQFKSSSDFSASRPLPKLSATVSVENCAASTSLSATSAVSEDTVLAGSNNEGMQKESLSRSNSLKDKQKKPEKKGQSQHQSQAVASVSSGSDGGVADRGVSETLKTTANHSAAMCSDDVPATPDMPLSTGGTVPSAIEAKDNYSKEMPGAQSVDSLNDQKHDKLEKLSQDDKLLDQNILETSDKNDRRPSECSQQNLNDSGSSVESVSSKSTKCEQPEDAAKIRDEVLISRTVQQRQEESRSGSAECDKIGDKLGMSISPALDSRDATSLSRNASVVNGESVIAYSGSLDQQSASAGSGSVYLPLSDTNDKPILEPNKVKATSKGKKKMREILQKADAAGSTSDLYNAYKGPEEKKEAIVSSDSSESTSSSDSSTQLLKDAPQLDAVTSEKGGQRKVEPDDWEDAADMSTPKLEVSDKMQQLSEGNGSTVKKYSRDFLLKLAEQCTGLPEGFEIRIDTAVALMSSSISGSLAIEHDPHPSPGRIDRSSGVSRMDRRGSGVVEEDRWSKVPGAFISGFRPSPGGNFGVLRSPHPQTPVQYSGGILAGPMQSMGPQGGMQRNDGERWQRGSSFQQRGLIPYPSQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFDKLFEQVKAVNIDNAVGLTGVISQIFEKALMEPTFCEMYANFCLLLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKIDEGEVEQSAVKREEKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIRKLLGQYEDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDSYFERMKLLSNNMNFSSRVRFMLKDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQLQTGRLGRGPSSNTSGRRMPMDFGSRGSYVWSSPNSQMGGMRGPPTQVRGIGYQDVRFDDRQSYEARTLSIPLPQRPLGDDSITLGPQGGLARGISIRGATAISNPPVSDVTPDPGDSRRITTSLNGYGQFSERGPTNSREDHMPRYVPDRFAGPAAYEQSGAQECNMNYGNRDLRNADRSLDRPVATSPARVQGPTVSQNASSEVWPEERLRDMSIAAIKEFYSARDEKEVALCVRDLNSPSFHPTMVSLWVTQSFERKDAERDLLAKLLVNLTKSQDGTLSQAELIRGFESVLSTLEDAVNDAPKAAEFLGRIFFKVITENVVSLKEIGQLIHEGGEEPGQLLKVGLAGDVVGSTLEAIQLEKGDAILNEICKSSNIKLESFRPPDPIKSSKLEKFI 1709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1289 1336 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1412 1453 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 744 760 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 846 861 - -
Bva01g00597 1709 SMART if4_15 1063 1285 IPR003890 GO:0003723|GO:0005515
Bva01g00597 1709 MobiDBLite consensus disorder prediction 423 442 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1314 1329 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1426 1445 - -
Bva01g00597 1709 Gene3D - 1063 1298 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 139 200 - -
Bva01g00597 1709 SUPERFAMILY ARM repeat 1057 1287 IPR016024 -
Bva01g00597 1709 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 104 178 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 744 784 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 611 645 - -
Bva01g00597 1709 Pfam MA3 domain 1528 1634 IPR003891 -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1289 1309 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 808 861 - -
Bva01g00597 1709 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 104 178 IPR045208 GO:0003743
Bva01g00597 1709 MobiDBLite consensus disorder prediction 646 669 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1497 1516 - -
Bva01g00597 1709 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 203 1699 IPR045208 GO:0003743
Bva01g00597 1709 MobiDBLite consensus disorder prediction 926 957 - -
Bva01g00597 1709 ProSiteProfiles MI domain profile. 1521 1645 IPR003891 -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 44 83 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 670 687 - -
Bva01g00597 1709 SMART ma3_7 1522 1636 IPR003891 -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1 83 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 569 728 - -
Bva01g00597 1709 Pfam MIF4G domain 1063 1285 IPR003890 GO:0003723|GO:0005515
Bva01g00597 1709 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 203 1699 - -
Bva01g00597 1709 Coils Coil 1145 1165 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 817 837 - -
Bva01g00597 1709 SUPERFAMILY ARM repeat 1517 1704 IPR016024 -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 501 557 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 297 316 - -
Bva01g00597 1709 Gene3D - 1517 1709 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 933 957 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 381 413 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 1502 1516 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 515 531 - -
Bva01g00597 1709 MobiDBLite consensus disorder prediction 381 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00597 Bva-Chr1 4451109 4458873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00597 1 377 Eukaryotic Initiation Factors Gene Family AT3G60240 34.979 8.19e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00597 K03260 - gmx:100796636 1942.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00597 01 4451109 4458873 Bva01g00597 01 4451109 4458873 ECH