Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00596 ATGGGGATTCTTGACTCATCGTTTGACGATTTTAACCCTGATATAATCAACGAGTTCGAGGAACTTAactgggaagaagaagaagatttggaGAAAGGGTCCTCAGAATCTAAAAGCTTCTTAGAGCAGCCACTTTGTGTTCCCCAAGACCCCATCGACGATTTACAATGGTACCCTAATTTCATAGACGACCTTATCTCTTTTAACTGCTTCGAATTCTTTGACACTAGAAAAGATACCGTTTCACACCAAAACAAGGGGTACGAGGAGGATGGCGAGCTGCAGCGACGACAACAGACAACAAACGGTGTCGTTGTGATGTACGAGGATGGCGCGTCGTCGTTTGGAAAGAAGCCAAGAAAAAAGAGGGTTCGTGGGAGCGCGTGGTTGAAAAGCGCGGCTGATTTTAAGAAACTAGAAAACGTGCATGGCAAGAAAAGGTGCAGCCATTGCGAGAGTGAAGAGACTCCATTGTGGAGAAATGGTCCTTTGGGGCAAAGAACTTTGTGCAATGCATGCGGAGTGAGATATAAGTCTGGAAGACTGTTGGCAGAGTATAGACCAGCTGCTAGCCCAACGTTTGATGGTAGAAAGCATTCCAATTTCCATAGGAGGATAACTAAGAAGAAAAGGCTTTCAGATta 644 0.4332 MGILDSSFDDFNPDIINEFEELNWEEEEDLEKGSSESKSFLEQPLCVPQDPIDDLQWYPNFIDDLISFNCFEFFDTRKDTVSHQNKGYEEDGELQRRQQTTNGVVVMYEDGASSFGKKPRKKRVRGSAWLKSAADFKKLENVHGKKRCSHCESEETPLWRNGPLGQRTLCNACGVRYKSGRLLAEYRPAASPTFDGRKHSNFHRRITKKKRLSD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00596 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 142 197 - -
Bva01g00596 214 MobiDBLite consensus disorder prediction 193 214 - -
Bva01g00596 214 ProSitePatterns GATA-type zinc finger domain. 148 173 IPR000679 GO:0006355|GO:0043565
Bva01g00596 214 PANTHER GATA TRANSCRIPTION FACTOR 33 211 - -
Bva01g00596 214 ProSiteProfiles GATA-type zinc finger domain profile. 142 178 IPR000679 GO:0006355|GO:0043565
Bva01g00596 214 PANTHER GATA TRANSCRIPTION FACTOR 4-LIKE 33 211 - -
Bva01g00596 214 Gene3D - 138 213 IPR013088 GO:0006355|GO:0008270
Bva01g00596 214 CDD ZnF_GATA 147 198 IPR000679 GO:0006355|GO:0043565
Bva01g00596 214 Pfam GATA zinc finger 148 182 IPR000679 GO:0006355|GO:0043565
Bva01g00596 214 SMART GATA_3 142 196 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00596 Bva-Chr1 4443536 4444180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00596 45 211 C2C2-Gata Transcription Factor Family AT3G60530 41.040 1.48e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva01g00596 GATA 1.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00596 - - twl:119983410 157.147