Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00568 ATGGGTGCTCGTTGCTCTAAGTTCTCTCTCTGCTGGTTCCACTCCCACCTCAAACCTTCCGTCCTTGAATCCTCCGACTTGGAAAATGGGGGCAAAAGTGAGAGAAACTTGTGGCCCAGTTTTGGCGAGTTTAGCTTGGAGCAATTGAAAGCTGCCACAAATGGGTTCTCCTCTGAGAACATTGTCTCTGAGCATGGTGAAAAAGCCCCCAATGTCGTTTATAAAGGGAAGGTCGAGAGTGGCCAGTGGATTGCCGTCAAACGCTTCAACAAGTTCGCTTGGCCTGATTCTCGCCAATTCCTCGAGGAAGCAAGGCAAGTGGGGAGTCTCAGAAGTGAGAGATTGGCTAATTTGATTGGTTGTTGCTGTGAAGGGGAAGAGAGGCTGCTTGTAGCTGAGTTTATGCCCCATGAAACTCTAGCCAAGCATCTCTTTCACTGGGAGACACAACCCATGAAATGGGCAATGAGATTGAGGGTGGCTTTGTACTTGGCTCAAGCTCTAGAATATTGCAGCAGTAAAGGGAGGGCTTTGTATCATGATCTGAATGCCTATAGGATCCTATTTGATCAGGATGGTAATCCTAGGTTGTCTTGTTTTGGGCTCATGAAGAACAGCAGAGATGGCAAAAGTTACAGTACTAACTTGGCTTTCACCCCTCCAGAGTACTTGAGGACAGGTAGGGTGACACCTGAGAGTGTGGTTTACAGTTTTGGAACCCTTTTACTGGATCTGCTGAGCGGTAAACATATTCCCCCAAGCCATGCACTTGATCTGATACGCGGCAAAAATTTTTTGATGTTGATGGATTCTGCATTGGAGGGTCACTTTTCAAAGGATGATGGAACTGAATTGGTGCGTTTGGCTTCGCGTTGTTTGCAATACGAAGCTCGCGAAAGGCCAAATGCAAAGTGCCTTGTTCAATCTCTAATGTCACTTCAGAAAGAAACTGAGGTTCCCTCGTATGCTTTGATGGGTATCCGGCACGAAACTGCATCTTCAGCAAAGCCATTGTCATTGACACCTTTTGGTGAAGCTTGTTTGAGACTGGACCTTACAGCCATACATGAAATATTGGAGAAGATTGGATACAAGGATGATGAAGGAATTGCCAATGAGCTTTCCTTTCAAATGTGGACCAGTCAAATGCAGGAAACATTGAACTTGAAGAAGCATGGAGACACTGCATTTCGAGCCAAGGACTTTGTCACCGCCATTGACTGCTACACACAATTCATAGATGGGGGGACCATGGTATCACCCACAGTGTATGCAAGACGCTGCTTGTCATTCTTGATGAATGACATGCCACAAGAGGCTCTGGGAGATGCCATGCAAGCTCAAGTTGTGTCTCCTGAGTGGTCCACTGCTTTATATCTTCAAGCAGCCTGTCTTTTCAGCCTTGGAATGGAAAACGATGCACAGGAAACTCTAAAGGATGGGACAAACATGGAAGGCAGAAAgaacaagaatta 1475 0.4597 MGARCSKFSLCWFHSHLKPSVLESSDLENGGKSERNLWPSFGEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKVESGQWIAVKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGCCCEGEERLLVAEFMPHETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKCLVQSLMSLQKETEVPSYALMGIRHETASSAKPLSLTPFGEACLRLDLTAIHEILEKIGYKDDEGIANELSFQMWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSFLMNDMPQEALGDAMQAQVVSPEWSTALYLQAACLFSLGMENDAQETLKDGTNMEGRKNKN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00568 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Bva01g00568 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Bva01g00568 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Bva01g00568 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Bva01g00568 491 SUPERFAMILY Protein kinase-like (PK-like) 35 319 IPR011009 -
Bva01g00568 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 491 - -
Bva01g00568 491 SUPERFAMILY TPR-like 387 480 IPR011990 GO:0005515
Bva01g00568 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Bva01g00568 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00568 Bva-Chr1 4294947 4298577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00568 44 310 Glycoside Hydrolase AT3G07070 34.915 5.09e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva01g00568 PK_Tyr_Ser-Thr 4.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00568 - - gmx:100814477 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00568 01 4294947 4298577 Bva01g00568 01 4294947 4298577 ECH