Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00563 atgGAAATGCCTCCCTACCACGACATGCCAATGCCTAATgatatgaagatgaagatgcaTACGAGCTTCTATTGGGGCAAAGATGTCATAGTGCTATTCTCAGGGTGGCCAGGCCAGTGCCTTGGCATGTACATATTAGCCCTTTTCTTTGTGTTCTTCCTAGCCATGGCTGCTGAGCTGCTTTCTAACCGGCCGGTGCTTAGGCGTGGCACGAATCCGGTCACCGGAGGGCTGACTCGGGCTGCAGTCCATGCCGTCCGTACAAGTCTGCTTTATTTGGTTATGCTTGCTGTTATGTCCTTCAACCTGGGGATCTTCATAGCTGCCGTGGTTGGCCACACTTTGGGATTCTTCATCGCCAAGTCTGGTGCTCTTGCCGACGCCAGAGAGGAGCATGGCTCCACCGACTCCTCTGCTAGTAAACCTTG 428 0.507 MEMPPYHDMPMPNDMKMKMHTSFYWGKDVIVLFSGWPGQCLGMYILALFFVFFLAMAAELLSNRPVLRRGTNPVTGGLTRAAVHAVRTSLLYLVMLAVMSFNLGIFIAAVVGHTLGFFIAKSGALADAREEHGSTDSSASKP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00563 142 Pfam Ctr copper transporter family 73 119 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bva01g00563 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 137 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bva01g00563 142 PANTHER CTR FAMILY COPPER TRANSPORTER 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00563 Bva-Chr1 4263575 4264398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00563 23 136 Inorganic Solute Cotransporters AT3G46900 46.087 3.16e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00563 K14686 - gmx:100808693 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00563 01 4263575 4264398 Bva01g00563 01 4263575 4264398 ECH