Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00542 ATGTCTCAGGCGATCGGAAGGAGTCAGTTGATCGGAGATTATATTATCAGCCGCCAAGTTGGAGCCGGGTCGTTCTCAGTGGTGTGGCTTGGGAGGCACAGAGTCCATGGAACCGAGGTGGCCATAAAGGAGATCGTCACGCAGCGACTCAACAAGAAGTTGCAGGAGAGTCTTGTGTCTGAGATATTCATCTTGAAGAGGATTAACCATCCTAATATTATCAGTTTGCACGACATCATAGAGGTCCCTGGAAAGATACATCTGGTGTTAGAGTACTGTAAAGGGGGTGatctctctttatatattcaaCGCCATGGAAGAGTCCCAGAGTCAACGGCAAAGCACTTTATGCAGCAGCTAGCTGCTGGTCTAAAAGTTCTTCGGGAAAATAATCTTATACATCGAGACTTAAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAGTCAGTGCTGAAGATCGCAGATTTTGGATTTGCAAGATCTCTACAACCTAGGGGCCTTGCAGAAACTTTGTGTGGTTCACCACTTTACATGGCTCCAGAGATCATGCAACTGCAGAAGTATGATGCTAAGGCAGATCTTTGGAGTGTTGGTGCAATTTTATTTCAGCTTGTTACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGTTATTGCAAAACATTATGAAATCAAACGAATTGCAATTCCCATCAGATAACCTATATCTGAGTTCTGACTGCAaagatttatgtaaaaaattgcTGCGCCGCAACCCagtgGAACGGCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTGCTCTTGCTCAGAAGCAACTAGAACCAGATGAATCATCGAGGATTAGTTCTTCAAGGATGGTGGGTGGAGTTTGTTTAGCAGAGCACAATTCATTGCAAAGAACTGATGAAAATTCTCAAGAAGATTGCTTACCTTTTCTTCTAGATGATGATTCAACTGGTCCAGAGAGGAGTCCATCATTTTCAAGGAAGAAGTCTTCAATGAAGTCTACCTATGGATTTGATGTGAATCCAAAAGTAGATAAATCAGATTCAGCATCCACTACTtctaataacataaatttcacTACCAGATATGGTACTGTGGCACATCGACCTGAAAACCCTGCCTTGGACAGTCATAGAATCTCTGTAAGAAACGTCACTGATCCTCTAGAATCTATGGAGCAAAGATGGGCAAATACTAGATCAAAAGTTGCGGATTCACTAGAAAATATTGATCAAGATTATGTACTTGTGTCTGGACCCCCTATGGAAGTCTCATCTTCTTCAGTGAGTGCTTCAAAGCCTGGCCGTTCTGTGCATAATAAGCTGGGTGGTTCCCCACAGGAGTCTTCTAATATAAATACTAGATTAAGTGCCCCAATGCCAATCCTTGGTGTAGCTACCAGCACAACATTTCGAATTGGAAGCTCAGAAAGTCAGGGATCTGCTCCAGGAACTTCACAAGGGTCAGTTGATACAGCGGATGAGCAGCCGTCAGCTCACTGCATGACAAGGATAAAATCATTGCAGCAGTGTGCATCTGCCATCATGGAATTAGTTAATGAAAAGATGGAGAGTGGAAAACAACTAGAAGCATTCTCTATTCAACTTGTCATTCTTGCAATTTGGAAGCAAGCGCTGCACATATGCCATGCACAGGCTGCCTCAGCCATGGAAGGAAGTCCAAGTCAAGAAACTACAAGATATAGGAGGAGCAATAGTAAGAAGCCGGGTAGTATTGATTCTGATGAATCCCTTGATGAAAACAACCAAGGACCAAAGgatattttatctcaaattgaaagagaatttCTGAGGGAATTTGAGCATGCTGAAGAACTTGCTAAGGCTGTTGAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGGAGACTTGGGGGTGTGGAAGAGCTGATGGACAACTTGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTGCGCTTGTTGAGTTTCCTTCTAGTTGAAGCTCCATCCCTCATTCTCAACCCTCCATTTTCACTGACAAACACAGACCGTTACAGGCTTCGGACATACATTGACATTCTTAACAACAGACAAGGCTATTCCAGGTCTCAGCGAATGACGCTTCTCAAGTGTGATGACAGACAAGGCATtcttaagaatta 2195 0.4155 MSQAIGRSQLIGDYIISRQVGAGSFSVVWLGRHRVHGTEVAIKEIVTQRLNKKLQESLVSEIFILKRINHPNIISLHDIIEVPGKIHLVLEYCKGGDLSLYIQRHGRVPESTAKHFMQQLAAGLKVLRENNLIHRDLKPQNLLLTRNDDKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSNELQFPSDNLYLSSDCKDLCKKLLRRNPVERLTFEEFFNHPFLALAQKQLEPDESSRISSSRMVGGVCLAEHNSLQRTDENSQEDCLPFLLDDDSTGPERSPSFSRKKSSMKSTYGFDVNPKVDKSDSASTTSNNINFTTRYGTVAHRPENPALDSHRISVRNVTDPLESMEQRWANTRSKVADSLENIDQDYVLVSGPPMEVSSSSVSASKPGRSVHNKLGGSPQESSNINTRLSAPMPILGVATSTTFRIGSSESQGSAPGTSQGSVDTADEQPSAHCMTRIKSLQQCASAIMELVNEKMESGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETTRYRRSNSKKPGSIDSDESLDENNQGPKDILSQIEREFLREFEHAEELAKAVEPGNTEMPDAMETIFQSALAFGRLGGVEELMDNLESAAALYSKAVRLLSFLLVEAPSLILNPPFSLTNTDRYRLRTYIDILNNRQGYSRSQRMTLLKCDDRQGILKN 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00542 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bva01g00542 731 MobiDBLite consensus disorder prediction 330 344 - -
Bva01g00542 731 CDD STKc_ATG1_ULK_like 20 270 - -
Bva01g00542 731 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00542 731 MobiDBLite consensus disorder prediction 560 599 - -
Bva01g00542 731 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00542 731 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Bva01g00542 731 MobiDBLite consensus disorder prediction 481 505 - -
Bva01g00542 731 Gene3D Transferase(Phosphotransferase) domain 1 6 324 - -
Bva01g00542 731 SUPERFAMILY Protein kinase-like (PK-like) 10 272 IPR011009 -
Bva01g00542 731 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00542 731 MobiDBLite consensus disorder prediction 426 464 - -
Bva01g00542 731 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 709 IPR045269 GO:0004674|GO:0006914
Bva01g00542 731 MobiDBLite consensus disorder prediction 575 596 - -
Bva01g00542 731 MobiDBLite consensus disorder prediction 303 345 - -
Bva01g00542 731 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 6 709 - -
Bva01g00542 731 MobiDBLite consensus disorder prediction 449 464 - -
Bva01g00542 731 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00542 Bva-Chr1 4135956 4142407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00542 10 282 CBL-interacting serine-threonine protein kinases AT2G30360 36.525 2.47e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Bva01g00542 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00542 K08269 - gmx:100791596 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00542 01 4135956 4142407 Bva01g00542 01 4135956 4142407 ECH