Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00539 ATGCATTGCATGGGTTCCTGCCGTATTAATCCTACTCTAAATCTCCGGTTTCCGTCCGATACGCCTCGTTTTTGGTCCACATGTCAGCTTCAGTTTCAAAATCACAATCCCTTTCACCCCTCACTTGCTAAGCTCATACCTTCTACTCCCaagATCTTGTTTTCCCATGCTCGGCGCCGTACCTGTGGTGCTGTGAGGTCTCACGTGGCCACCGAGGATAAACCGGTTTCTGAGGACAGAATGCTTGTGTACGTGCCTCCGCATCCTTTGATCAAGCACTGGGTTTCAGTTCTGAGGAACGAGCAGACTCCTTGTCCTATCTTCAAGAATGCAATGGCCGAGTTGGGAAGGCTACTAATATATGAAGCTTCAAGGGATTGGTTGCCTACTGTTGCAGGAGAAATTCAGTCACCCATGGGTGTTGCCTCGGTTGAGTTTATAGATCCCAGGGAGCCTGTGGCTGTCATTCCAATCTTGAGGGCTGGTCTAGCTCTTTCAGAACACGCAGCATCAATCTTGCCAGCAACAAAAACGTATCATTTGGGAATAAGCAGAGATGAGGAAACACTTAAGCCAACTATATATCTCAACAAACTACCTGATAAATTTCCAGAAGGATCTAAAGTGTTTGTGGTTGATCCTATGCTGGCAACAGGCGGTACCATAGTGGCAGCTCTCAGCCTCTTGAAGGACCGAGGAGTTAGCAACGACCAGATAAAAGTGATATCTGCCGTGTCTGCCCCTCCGGCCCTGCAAAAGCTGAGCGAGCAATTCCCCGGACTCCATGTGTATACCGGAATTATTGATCCTACAGTCAATGACAAAGGGTTTATAATTCCTGGACTTGGAGATGCTGGGGACAGAAGCTATGGTACATG 878 0.4784 MHCMGSCRINPTLNLRFPSDTPRFWSTCQLQFQNHNPFHPSLAKLIPSTPKILFSHARRRTCGAVRSHVATEDKPVSEDRMLVYVPPHPLIKHWVSVLRNEQTPCPIFKNAMAELGRLLIYEASRDWLPTVAGEIQSPMGVASVEFIDPREPVAVIPILRAGLALSEHAASILPATKTYHLGISRDEETLKPTIYLNKLPDKFPEGSKVFVVDPMLATGGTIVAALSLLKDRGVSNDQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00539 292 Pfam Uracil phosphoribosyltransferase 85 292 - -
Bva01g00539 292 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 44 288 - -
Bva01g00539 292 PANTHER URIDINE KINASE 44 288 - -
Bva01g00539 292 TIGRFAM upp: uracil phosphoribosyltransferase 83 292 IPR005765 GO:0004845|GO:0006223
Bva01g00539 292 CDD PRTases_typeI 148 268 IPR000836 -
Bva01g00539 292 SUPERFAMILY PRTase-like 83 291 IPR029057 -
Bva01g00539 292 Gene3D - 72 292 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00539 Bva-Chr1 4124039 4127878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00539 15 292 PRT Gene Family AT3G53900 65.734 2.10e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00539 K00761 - pvy:116114985 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00539 01 4124039 4127878 Bva01g00539 01 4124039 4127878 ECH