Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00533 ATGCCCACTTCCATGCGCTGTAGGTCAGTGGACACGTCAGCACTTCATGGGCCCCGGATTCCACTACCCCGCACATCATTTATCAaatctatttttgaaattttcaagtcCGCTGAGTCAGAGAAGGAAAATGGCAAGATGTGGGCAGACGTCACTGACTTTTGGGTGGAAAGACAAAGTGTCactctctttttcacttttctttcttctttggatTTGTATTATGCATCGAATTTTGAGGTGGCAGATTCACTAAGGACGTGTTCATCAACTTTGAGCTGCTTCGTGTCCAAAGGTTTTAGTTGTGGCCTTTCTTCTAAAAACTGTAAGAAGTATTCTGAGGATTTTGCTGGCGGCTGTTTAcgtttattttctcataatttttcgTTGGGGTCAAGCTATGGTGGTCTTTTGGTTCCTGAGTACAACAAGACCACCAATCAAAAGAAGAGCAGGTTTACGGATCAAACAAGCGGGCCGAGGTTCTTACCGGGGAAGCTAGGGTTGTTAAAGAGCTTTTGTGATTATTCACATTGGAAGTATGCTGTGTTTTGGAAGCTTAGTCATCATTCTCCCATGACTTTGACCTGGGAAGATGGATACTTTGATTACCAGAAGACAAATGAGGCTGAGGAAAGTATCTGGAGTAATGTTGACCCCAAAGGCACAGATGCTGTTTCAGGATCAGTTCAGTTACTAATGACTGAAATGTCTCATCTTAAGTACACTTTGGGAGAGGGGTTTGTTGGCAAAATAGCTCTCTCAGGGGATCATTCTTGGCTTTTCTGTGAAGATGTTTTTACCagtaaatcaaatataaacttaatCCCAGAGTGTTCCTTTGAATGGTTGCTTCAATTAGCATCAGGTATCAAGACTGTTGTGCTGGTACCGGTTCTTCCACAAGGAGTTTTGCAGTTTGTTCATATGAAATGGTTGCAGAAGATCTGGCATTTGTTACCAATATCAGGCAGAAATTTAATTCCATTTACTGTATG 998 0.3908 MPTSMRCRSVDTSALHGPRIPLPRTSFIKSIFEIFKSAESEKENGKMWADVTDFWVERQSVTLFFTFLSSLDLYYASNFEVADSLRTCSSTLSCFVSKGFSCGLSSKNCKKYSEDFAGGCLRLFSHNFSLGSSYGGLLVPEYNKTTNQKKSRFTDQTSGPRFLPGKLGLLKSFCDYSHWKYAVFWKLSHHSPMTLTWEDGYFDYQKTNEAEESIWSNVDPKGTDAVSGSVQLLMTEMSHLKYTLGEGFVGKIALSGDHSWLFCEDVFTSKSNINLIPECSFEWLLQLASGIKTVVLVPVLPQGVLQFVHMKWLQKIWHLLPISGRNLIPFTV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00533 332 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 170 318 IPR025610 -
Bva01g00533 332 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 169 310 IPR043561 GO:0003700|GO:0006355
Bva01g00533 332 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 169 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00533 Bva-Chr1 4086537 4091682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00533 169 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.429 3.50e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00533 - - lang:109360470 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00533 01 4086537 4091682 Bva01g00533 01 4086537 4091682 ECH