Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00532 ATGAATCTCCAAGATTGGTCGCTCTCTTTCCTAACAGAATATCATATGGATGAGTTGCACGAATCATCTTATATTGCAAAAAATATACTGAAAGTTGAACTTTCTGATGGCATTTCACTCAATACAGTTGGATCAACATGGCCAAATCCAACAGTCCCATTATTTGTTCAGGATAAGTGCTGCTTATCGGGAGAAGGTGATCCAGAATTTCTCAAAAGTGAAAGTGAAAATGGGATTCATTTGCGATCAACTGTGGTCTCAAATGATCAGCAGAAGATGAAATCAGATCAGATGGAGCATGAAGTACAAGCCTGTTCTGCATGGTTCAAAGGTGTGCCTGTATTTGGAGAGACATCAAATGGAATATTGTACTCTGGTAAAGATTTAGCAGAACAATTTGAAGAAACTGACATCCATCACATAAGTTTTAAGAATGTGAATAGTTTCTTCCCTTTTCCCTTAGACTGTGAATTGCATAGAGAACCTGAACATCTGGCTAATAGAGAGGCAGCCAAATCGACCTTCAAACATTTCTCAGTTGAAGATATGTGCAGTAACTCAACGCTGATGGCCAATGAGAATAAGCATAATCTTATTGATGATTTAATGTTTCCCATGGAAGGAAACGTCAAATACCTTTTAGATGCTGTTGTTGGAAATTTATGTAGTGCCTCAGATGATAATTCATCAAGTGTATCAAATAGTGATATGTCTCCTGTAACATTGCTTGATAAATTTACTGCTTCGATTCAACCTCATAGTCATTCTGAAGAAACCTCTTTAATGGTGAATAACTCAAATCCGAGAATCCATGTTCCATCAGCAATTGTGGCCGAAGGCACCTATGAGTTTACGACTCCTTCTACACCATCTTTTGATTGCAATTCAAGCATATTGAATGATAGGAGCAGGAAGGAATTTATTTTCGGTCAGATGCAATCTAATAGTGGACCAAAGCTTTCTTCCCcgagcaaaaaaaaaaccagaaCTGGTAATACTCCAAGGTCAAGACCAAGGGATAGACAGTTGATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGCAGGTGTAGCGTTGACAACCTCTTAGATCGGACCATAAAGCACATGCTGTACTTACAGAACATAACTAGCCAGGCtgagaaattgaagaaatgtGTGCCTTGGGAGGTGTCTGAGTGCAAGAGGCAGAAACATAACGACAGCCATAGTGGGAGAAGCTGTGCATTTGACTTTAAAAGTGAACACCAAGTTTTCCCAATAGTCATAGAAGATCTTGAATGCTCAGGACACATGCTCATTGAGATTGTATGCAGCGAGCATGGACTATTCTTGGAGATTGCCCAGGTTATTAGACGGATGGAGCTCACCATCTTGAAAGGTGTTTTAGAAAGCCGTTCAAGCACCACTTGGGCTCGTTTCACTGTTGAGGTACCCAGAGGATTTCATCGAATGGACGTGTTGTGTCCTTTGTTGAATCTTTTGCAGCTTAGAAGGAAACCTATGACAATCAGAGTTTG 1532 0.3943 MNLQDWSLSFLTEYHMDELHESSYIAKNILKVELSDGISLNTVGSTWPNPTVPLFVQDKCCLSGEGDPEFLKSESENGIHLRSTVVSNDQQKMKSDQMEHEVQACSAWFKGVPVFGETSNGILYSGKDLAEQFEETDIHHISFKNVNSFFPFPLDCELHREPEHLANREAAKSTFKHFSVEDMCSNSTLMANENKHNLIDDLMFPMEGNVKYLLDAVVGNLCSASDDNSSSVSNSDMSPVTLLDKFTASIQPHSHSEETSLMVNNSNPRIHVPSAIVAEGTYEFTTPSTPSFDCNSSILNDRSRKEFIFGQMQSNSGPKLSSPSKKKTRTGNTPRSRPRDRQLIMDRMKELRELVPDGGRCSVDNLLDRTIKHMLYLQNITSQAEKLKKCVPWEVSECKRQKHNDSHSGRSCAFDFKSEHQVFPIVIEDLECSGHMLIEIVCSEHGLFLEIAQVIRRMELTILKGVLESRSSTTWARFTVEVPRGFHRMDVLCPLLNLLQLRRKPMTIRV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00532 510 MobiDBLite consensus disorder prediction 310 329 - -
Bva01g00532 510 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 61 506 - -
Bva01g00532 510 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 61 506 IPR043561 GO:0003700|GO:0006355
Bva01g00532 510 MobiDBLite consensus disorder prediction 310 342 - -
Bva01g00532 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 328 377 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00532 Bva-Chr1 4086537 4091449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00532 212 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 35.986 2.01e-48 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00532 - - aprc:113862780 460.299