Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00522 ATGGCCAACAACAACCTCAGCCTTCTCAAACTGGTGTCTCTGTTACTGTTCCTTCTGATCCCAGGTTCATCTCAGCTCGATGAGCTCACTTTTGCTGGATTTAATGATGTGGGTTCCAATTTAACCTTGAATGGGATAGCAGAAATTCAGAAAAATGGGATCTTGAAATTGACAAATGAGACAAGCAGGTTAATGGGTCATGCTTTCTATCCCACCCCTTTTAAGTTCAAGAACTCCACCAGTGGTAAAGCTTTCTCCTTTTCCACCTCATTTGCTCTGGCTATTGTCCCTGAGTACCCTAAGCTTGGTGGGCATGGCTTGGCTTTCACCATAGCAACTTCCACGAATCTCAAAGCTCTCCCTAGCCAATACCTCGGACTCCTCAATAACAGCGACGTTGGCAACTTCTCCAACCACCTCTTCGCTGTCGAATTCGACACTGTCCAAGATTTCGAGTTTGGGGATAAGGATGATAACCATGTCGGAATCGACATCAATAGCATGGTGTCCAATGCTTCAGCTACTGCAGGTTACTTCACTGATGATTCAACTCAAAAAGAACTGAGCTTGAAAAGTGGGAAAGCGATTCTAGCTTGGATCGATTACGATTCAGCTCAAAATCTCATTAGTGTTactctttctccttcttcttcaaaaCCCAAAAAGCCAATCTTGACATTCAATGTAGATCTCTCTCCGATTCTGACTGAATCTATGTACGTTGGGTTCTCTGCTTCAACGGGTTTGCTGGCAAGCTCTCATTACATATTGGGTTGGAGCTTTAAAATCAATGGACCAGCTCCACCCcttcctctctcttctctcccaTCACTTCCACAGCTAAAGAAGAAGCACACGTCTCTGATTCTTGGAGTTTCACTCTCAATGGTTATTATAGTGCTATCTGCTATTCTGGTTGGCATTTACATCTTCAGAAAAATCAAGAACGCTGATATTATAGAAGCTTGGGAGCTAGAAGTAGGGCCACACCGTTACTCCTACAAAGAGCTCAAGAAAGCTACAAGAGGATTCAAGGACAGAGAGCTATTGGGGCAAGGCGGGTTTGGCAGAGTTTACAAAGGAACACTTCCAAGTTCAAAAACGCCAGTTGCCGTGAAGCGAGTTTCACACGAATCCAAACAGGGTCTACCAGAATTTGTATCAGAAGTAGCAAGCATAGGCCGTTTGCGCCATAGGAACTTGGTTCAATTACTGGGTTGGTGTCGCCGCCGGGGAGATTTGCTTCTTGTCTATGATTTCATGGCCAATGGCAGCTTAGACAAGTACCTATTTGACGAGCCTGAAACTATTCTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGATGTGGCTTCAGCACTTCTCTATCTCCACGAAGGCTATGAGCAGATAGTGATTCACAGAGATGTGAAGGCCAGCAATGTGCTGCTAGATTGTGAACTCAATGGAAGATTAGGTGACTTTGGCTTAGCTAGATTATATGAACATGGGGCTAACCCAAGCACCACAAGGGTGGTGGGCACATTGGGTTACTTGGCACCAGAGTTACCAAGAACAGGAAGAGCCACAACAAGTTCTGATGTGTTTGCATTTGGTGCACTCATGCTAGAGGTTGTGTGTGGGAGAAGACCCATTGAGCCAAAGGCAGTGCAAGAGGAGCTGGTCTTGGTGGATTGGGTTTGGGAGAGGTTCAAAGAAGGGAAGGTGTTTGATATTGTGGACCCAAAATTGAATGGTGATTTTGATGAGGGTGAGGTGAGTATGTTGGTGAAATTAGGGTTGATGTGCTCAAATGATGTGCCTTCTTCTAGGCCAAGCATGAGGCAGATTGTGAGGCACTTGGATGGTGAAATTGGGGTCCCAGAGGATGTGACAAAGCCAGGGGGGATTCCTCAGCAAGAAGGGTTTGATGAGTTCTTGCATTCActtgcatcttcttcttttgataaGATGAGTGCTGGCTCTTTTGTGGGACGTAGGGAATTTGATGGTAGGTTTACTTCTTTTGGTAATTCTCCTCTTACCAATGTCCGAGGGGAAACAAGGTG 2048 0.439 MANNNLSLLKLVSLLLFLLIPGSSQLDELTFAGFNDVGSNLTLNGIAEIQKNGILKLTNETSRLMGHAFYPTPFKFKNSTSGKAFSFSTSFALAIVPEYPKLGGHGLAFTIATSTNLKALPSQYLGLLNNSDVGNFSNHLFAVEFDTVQDFEFGDKDDNHVGIDINSMVSNASATAGYFTDDSTQKELSLKSGKAILAWIDYDSAQNLISVTLSPSSSKPKKPILTFNVDLSPILTESMYVGFSASTGLLASSHYILGWSFKINGPAPPLPLSSLPSLPQLKKKHTSLILGVSLSMVIIVLSAILVGIYIFRKIKNADIIEAWELEVGPHRYSYKELKKATRGFKDRELLGQGGFGRVYKGTLPSSKTPVAVKRVSHESKQGLPEFVSEVASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETILSWEQRFKIIKDVASALLYLHEGYEQIVIHRDVKASNVLLDCELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALMLEVVCGRRPIEPKAVQEELVLVDWVWERFKEGKVFDIVDPKLNGDFDEGEVSMLVKLGLMCSNDVPSSRPSMRQIVRHLDGEIGVPEDVTKPGGIPQQEGFDEFLHSLASSSFDKMSAGSFVGRREFDGRFTSFGNSPLTNVRGETR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00522 682 Pfam Legume lectin domain 29 275 IPR001220 GO:0030246
Bva01g00522 682 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 11 654 - -
Bva01g00522 682 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00522 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 283 IPR013320 -
Bva01g00522 682 SUPERFAMILY Protein kinase-like (PK-like) 326 614 IPR011009 -
Bva01g00522 682 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Bva01g00522 682 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246
Bva01g00522 682 Gene3D - 28 269 - -
Bva01g00522 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bva01g00522 682 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Bva01g00522 682 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Bva01g00522 682 Pfam Protein tyrosine and serine/threonine kinase 347 614 IPR001245 GO:0004672|GO:0006468
Bva01g00522 682 CDD STKc_IRAK 350 616 - -
Bva01g00522 682 PANTHER - 11 654 - -
Bva01g00522 682 ProSiteProfiles Protein kinase domain profile. 344 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00522 Bva-Chr1 4032437 4034867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00522 23 627 Receptor kinase-like Gene Family AT3G55550 62.908 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva01g00522 PK_Tyr_Ser-Thr 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00522 - - gmx:100784346 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00522 01 4032437 4034867 Bva12g02396 12 18134375 18136808 ECH
Bva01g00522 01 4032437 4034867 Bva01g00522 01 4032437 4034867 ECH