Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00510 ATGGTGGAATCAAATTCAACAACCTCAGAGACAATGATGGAGGAAATAATGGCTACTAATTCTTGGTCAGAAGCGTCAGAAGACAATGATGAGCTTGTTAGAGAGCTCTTAGACGATGAGTCTCCTCTTATTATGCTGCCAGAGCAGCCAATTGAACCCAACACGAGGCTTAATAATTCAACTGAAAAAGAGATTAACAGGTTCATCTCCACTGTCTATTCAGGGCCTACCATTACTGATATTGAAAATGCTCTGTCAGTCACCAACCAGAAGGTCCATTTCCAAGAACTCTCACCAGCCAGGGTTTCCATATTGGAAAGGGGTTTGAGTAAGATTGACAATAAGTATACTCTGAAAATCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAATATGGACAGAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTAGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTATGAAGGGCTCCATCTACACTTTACTTACCCATATTTGCTCCTTAGTCAAGTACAGCAACCCAATCCTCCACCATCAAAGAAGCCCAAGACAAGCATTTCACAGGCCCAATACATTGAAGCCCAAGAACCCAACCATGCCTATGAAGCCCATCAGGCCCAAGAAGCCCAAGATACTTTAGCTGATGCTACTTCTTCAGGCCTATCAACTTTCATGGAAACTCAACAAGAAACAACCAATGAAGCAATGGGCCCACAAGGGTTGCTTGAAGATATGGTGCCTTTGATGATCAGGAACCCTCCAAAAAGTAGTGCcaactcaaaattttcttgttcctCGTACCATTCTCCTCCAACATCACCTCCTTCAATGTCTTGGTCTTCTAATTATTCCAACTTATGGCATTCTATTGGCTTAAATCTCTA 959 0.4192 MVESNSTTSETMMEEIMATNSWSEASEDNDELVRELLDDESPLIMLPEQPIEPNTRLNNSTEKEINRFISTVYSGPTITDIENALSVTNQKVHFQELSPARVSILERGLSKIDNKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFTYPYLLLSQVQQPNPPPSKKPKTSISQAQYIEAQEPNHAYEAHQAQEAQDTLADATSSGLSTFMETQQETTNEAMGPQGLLEDMVPLMIRNPPKSSANSKFSCSSYHSPPTSPPSMSWSSNYSNLWHSIGLNL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00510 319 ProSiteProfiles WRKY domain profile. 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva01g00510 319 Pfam WRKY DNA -binding domain 129 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva01g00510 319 MobiDBLite consensus disorder prediction 277 305 - -
Bva01g00510 319 SUPERFAMILY WRKY DNA-binding domain 126 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva01g00510 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 296 IPR044810 GO:0003700
Bva01g00510 319 MobiDBLite consensus disorder prediction 278 305 - -
Bva01g00510 319 Gene3D WRKY domain 124 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva01g00510 319 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 24 296 - -
Bva01g00510 319 SMART WRKY_cls 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00510 Bva-Chr1 3983643 3986554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00510 40 279 WRKY Transcription Factor Family AT5G43290 45.276 2.30e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva01g00510 WRKY 6.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00510 - - gmx:100810459 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00510 01 3983643 3986554 Bva01g00510 01 3983643 3986554 ECH