Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00506 ATGGAAGAAGAGGTGGATGATAAGGCATGCATGCTTCAAGACTCCTTGGATCTTCAAGCCGCTGAGAAGTCGTTCTATGATGTACTAGGTGAAAAGTACCCACCTTCACCTGAACCAAATCCGAGTCTTGTCAATCAAAATGATGGGGTCCTGGATGATGATTTCTCGGGAAATTATGGTACTTTTCTTGGTAATTATGCTGATGTCAGTGGAATTGTTGCTGAGAACTCCTTGCTTCAAAACCCTGGGGGATTTCCCTCAAAAGGTCTCCAAGGTAATAGCATTTCAAAGTCATCTTATACTTCTTCAAATAGTGTAATGAGTAGTGTGGAAGGGCCAGTGGACTCTCCGAACAGTCTGACCAGTGAGAGTCAGTCCATTTGGCAATTCATGAAAGGTATGGAGGAGGCTAGTAAGTTTCTTCCTAGCGGAAATGAGCTGTTTGGTAATTTGGATGTTACTTTGTTTCCAAAAGAACCAAAAGTGGGGCCTGTTGATAAGTCAGTTAAGGTTGAGAAGGAAGAGGGTGAGTATTCTTCTGGTCGATCACATGGAAGGAAGCATTCTCACCAGCAAGTGGAAGGTTTTGAAGAAGAGAGGAATAGCAAGCAAGCGGCAGTATATACAGAACCAACATTGCGGTCAAATATGTTTGATATAGTGCTGCTTCATAGTGCAGGGGAAGGTAAGGTCCATTTTTCGGCTCGTCGCGAGGCTTTGCAGAACAAGACCAGCAAGACAGTTGTGCCAAACGGTCAGTCAAAAGTTTCCAATGGTGGGAAAGGACGtggtaagaaacaaaatgggaAAAAGGAAGTGGTCGATTTGAGGACGCTTCTCGTCCTTTGCGCGCAAGCTGTTGCGGCAGATGACCATAGGAATGCACATGAACTGCTGAGGCAGATTAGGCAGCACTCGAGCCCCTTTGGGGATGGAAACCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAGGCACGCTTGGCTGGTACTGGTAGCCAGATTTATAAAGGACTTATAAGTAAAAGGAGGTCAACTAGTGACCTTCTCAAAGCttattatcttttccttgCTGCATGTCCTTTCAGAAAGATTACTGATTTTATCACAAACTTCACGGTAAGAACATCTGCAGAAAATTCACCAAGGGTCCATGTTATAGATTTTGGTATCCTTTACGGTTTCAATTGGCCCACCTTAATACAGAGATCTTCATGGAGAGAAGGAGGACCACCAAAAATTCGAATTACTGGGATAGATTACCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTTGAAGAAACAGGACGCCGCTTGGCCACCTATGCAGATACTTTCAACGTGCCATTTGAGTATACTGCTATTGCAAAGAAATGGGAAACCATTCAACTTGAGGATCTCAAGATAGACAGGGATGAATTCCTTGTTGTTACCTGTTTATATCGAGGTAAGAATTTGCTGGATGAATCTGTGGCAGTGGACAGCCCAAGAAATGTTTTCCTCAATTTGGTGAGGAAGATCAATCCGAATTTATTCATTCATGGAATCACTAATGGGGCCTTTAATGCCCCTTTCTTTGTTACCCGATTCAGGGAGGCTCTATTTCACTATTCTTCACTATTTGACATGCTTGAAACCATTGTACCTCGTGAGGACTGGGAGAGGATGCTGATTgagaaagagatatttgggAGGGAGGCATTGAATGTTATAGCTTGTGAGGGCTGTGAGAGAGTGGAGAGACCAGAGACATATAAGCAATGGCAAGCCCGTAACCTGAGGGCTGGGTTTGTGCGGCAACCCTTTTCTCGTCACGTAGTGGCGAGGGCAATGGAGAAAGTAAGGACTTGCTACCACAAGGATTTTGTAATTGATGAAGATAACGGGTGGTTGTTGCAAGGCTGGAAGGGGCGAATCATTTATGCTCTTTCTTGCTGGAAACCTGCATG 1949 0.4356 MEEEVDDKACMLQDSLDLQAAEKSFYDVLGEKYPPSPEPNPSLVNQNDGVLDDDFSGNYGTFLGNYADVSGIVAENSLLQNPGGFPSKGLQGNSISKSSYTSSNSVMSSVEGPVDSPNSLTSESQSIWQFMKGMEEASKFLPSGNELFGNLDVTLFPKEPKVGPVDKSVKVEKEEGEYSSGRSHGRKHSHQQVEGFEEERNSKQAAVYTEPTLRSNMFDIVLLHSAGEGKVHFSARREALQNKTSKTVVPNGQSKVSNGGKGRGKKQNGKKEVVDLRTLLVLCAQAVAADDHRNAHELLRQIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRRSTSDLLKAYYLFLAACPFRKITDFITNFTVRTSAENSPRVHVIDFGILYGFNWPTLIQRSSWREGGPPKIRITGIDYPQPGFRPAERVEETGRRLATYADTFNVPFEYTAIAKKWETIQLEDLKIDRDEFLVVTCLYRGKNLLDESVAVDSPRNVFLNLVRKINPNLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQARNLRAGFVRQPFSRHVVARAMEKVRTCYHKDFVIDEDNGWLLQGWKGRIIYALSCWKPA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00506 649 MobiDBLite consensus disorder prediction 167 203 - -
Bva01g00506 649 PANTHER SCARECROW-LIKE PROTEIN 9 1 648 - -
Bva01g00506 649 MobiDBLite consensus disorder prediction 242 261 - -
Bva01g00506 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 648 IPR005202 -
Bva01g00506 649 MobiDBLite consensus disorder prediction 96 121 - -
Bva01g00506 649 Pfam GRAS domain family 276 647 IPR005202 -
Bva01g00506 649 ProSiteProfiles GRAS family profile. 267 647 IPR005202 -
Bva01g00506 649 MobiDBLite consensus disorder prediction 242 269 - -
Bva01g00506 649 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00506 Bva-Chr1 3953991 3957228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00506 2 648 GRAS Transcription Factor Family AT2G37650 55.251 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva01g00506 GRAS 2.7e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00506 - - gmx:100801824 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00506 01 3953991 3957228 Bva01g00506 01 3953991 3957228 ECH