Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00502 ATGGGTGCTTGCTGGAGCAACCGGATTAAGGCCGTGTGTCCTTCTAGTACAGGTTTTACTTCTAGAAATGTGAGCAGAAGTCGCAATGACATCAGCTCAGAAAGCAGGAACTCATCAGCTTCCATCCCCATGACTCCCCGGAGTGAGGGTGAGATCTTATCATCTTCTAATTTGAAGAGTTTCACCTACAGTGAACTAAGAACAGCAACAAGAAATTTCCGCCCTGATAGTGTCTTAGGAGAGGGTGGTTTTGGCTCGGTCTTTAAGGGGTGGATTGATGAACATTCACTTGCTCCTACCAAGCCAGGAACTAGCATGGCTATTGCCGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGTCACAAGGAGTGGTTGGCCGAAATCAACTACCTTGGGCAACTGCATCATCCTAACCTTGTCAAGTTGATAGGCTACTGCTTCGAGGATGATCATCGGCTTCTAGTTTATGAATTTATGCTTAAGGGTAGTGTGGAGAATCATCTTTTCAGGAGAGGTTCTCATTTTCAGCCACTCTCTTGGAACTTGAGATTGAAAATTGCCCTTGAGGCTGCAAAGGGTCTTGCTTTTCTTCATAACACCGAAACTAAAGTCATATACCGTGACTTCAAGACTTCTAACATCCTGCTTGATAGTAAATACAATGCCAAACTCTCTGATTTTGGATTGGCCAGAGATGGACCCATCGGTGATAAGAGCCATGTTTCTACAAGGGTGATGGGAACCCAGGGATATGCTGCACCAGAGTATATATCAACAGGCCATCTCACTCACAAGAGTGATGTATATAGTTTTGGAGTAGTTCTTTTGGAATTGTTATCGGGAAGACGAGCTATAGACAAGAACCGGCCAACCGGAGAACACAACCTAGTTGAATGGGCAAAACCATACTTATCAAATAAGCGTAGAGTTTTTCGTGTTATAGATGGCCGTCTTGAGGGTCAGTATGCCCTTAGTAAAGCTCAAAGGGCAGCCAGCCTTGCTTATCAGTGTCTTTCAATGGAACCTAAGTTCAGGCCAAGCATGGATGAAGTGGTTAAAGCATTGGAGCAGCTTCAGGACTCAAAGGACACTCAGAGAAGTGCAGATCATCGAAATCATCGCTCTGGCCATAGCCATCCCAATAACATGCCTGCACACCGCAGAGGTGGTGTAGAAGGTGCACCTACAAAAACTACTTATCCCAGGCCTTCTGCTTCTCTCCTTTATGCTTa 1232 0.4529 MGACWSNRIKAVCPSSTGFTSRNVSRSRNDISSESRNSSASIPMTPRSEGEILSSSNLKSFTYSELRTATRNFRPDSVLGEGGFGSVFKGWIDEHSLAPTKPGTSMAIAVKRLNQEGFQGHKEWLAEINYLGQLHHPNLVKLIGYCFEDDHRLLVYEFMLKGSVENHLFRRGSHFQPLSWNLRLKIALEAAKGLAFLHNTETKVIYRDFKTSNILLDSKYNAKLSDFGLARDGPIGDKSHVSTRVMGTQGYAAPEYISTGHLTHKSDVYSFGVVLLELLSGRRAIDKNRPTGEHNLVEWAKPYLSNKRRVFRVIDGRLEGQYALSKAQRAASLAYQCLSMEPKFRPSMDEVVKALEQLQDSKDTQRSADHRNHRSGHSHPNNMPAHRRGGVEGAPTKTTYPRPSASLLYA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00502 410 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Bva01g00502 410 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
Bva01g00502 410 MobiDBLite consensus disorder prediction 16 53 - -
Bva01g00502 410 PANTHER KINASE 1B 22 384 - -
Bva01g00502 410 PANTHER OS01G0588500 PROTEIN-RELATED 22 384 - -
Bva01g00502 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Bva01g00502 410 MobiDBLite consensus disorder prediction 360 376 - -
Bva01g00502 410 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Bva01g00502 410 SUPERFAMILY Protein kinase-like (PK-like) 39 355 IPR011009 -
Bva01g00502 410 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
Bva01g00502 410 MobiDBLite consensus disorder prediction 360 410 - -
Bva01g00502 410 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00502 410 CDD STKc_IRAK 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00502 Bva-Chr1 3926201 3929258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00502 51 370 Glycoside Hydrolase AT3G07070 50.156 6.51e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva01g00502 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00502 - - gmx:100795058 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00502 01 3926201 3929258 Bva01g00502 01 3926201 3929258 ECH