Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00496 ATGGCAACTCTTAGCTGCACATTAAACACTCCGAAAACTGTCAAATCCTGCACTCCGAGGAAACCCTCCAACCCCAGCTCAATTTCCAAGGTCAGGGTCATAGTCAGGGTCCGGCCCTTTCTTCCTCATGAAATTTCAGCTAGGAATCACGACCCTGTTCCATGTGTCTCCGTTCTGGACCAAGATTTTGAGTCACCAGAAGAAATTGCTGTTTATTTGAAAGACCCAGAAACcagCCGGAATGAGTGCTATCAGTTAGACTCCTTTTTCGGCCAAGAGGATAACAATGTGGGTGAAATATTCTTCAGAGAAGTAAGCCCTTTTATACCAGGAATCTTTAATGGCTGCAACGCAACTGTGTTCGCTTATGGAGCTACCGGCAGTGGTAAAACATATACCATGCAGGGAACTGAGGAACAACCAGGCCTAATGCCACTGGCAGTGTCCATGGTCCTGTCTATTTGTCAGAACACTGGCAGCACAGCACATATTTCTTACTACGAGGTTTATATGGACAGATGTTATGATCTCTTGAAAGTCAAAGCAaaggaaatttcaattttggaCGACAAAGATGGGCAAATTCATCTTCGCGGATTATCTCAAGTTCCTATAACAACAATGTCAGAATTTCAGGAGGTTTTCTCCAGCGGCGTTCAGAGAAGGAAAGTTGCACACACAGGTCTCAATGATGTGTCTAGTAGGAGTCATGGAGTGCTTGTGATTTCTGTCTCTACTCCTTCTAGTGATGGCACTGCAGCAACTGTCAATGGAAAGTTGAATCTCATTGATTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCTAAGATAAACCAGTCCTTATTTGCATTGTCTAATGTGATATTTGCATTGAACAACAATATGCCCCGAGTGCCCTACAGAGAAAGCAAATTGACACGTATATTGCAAGACTCTCTGGGAGGAACTAGTCATGCCCTGATGGTTGCCTGTCTGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTCAGTTTGGCTGCTCGGTCAAGACGCATCTCTAATTTTGTTCCTTCAGCTCATAAGCAAGAGACTCCAAAAGTTAACGTTGACATGGAAGCCAAATTGAGAGCTTGGCTAGAATCAAAGGGAAAAACAAAGAGCTCACAAAGACTTGGACCATTGAAATCTCCATGTTGGAGACAGACTCCTAAATCCATCATCTCTGCGAAGAGATCTATTACACATAATGGTTCTGTGAAAGGAATAAGTACCACAAACCAAGAAGCTGCATATACGAAAGAAAGGGCTTTCGTGGTggcatttcaaaatttactaGATGAAGAGGATGCTTTCAGTTCTTGCTTGGAGAGCCATCATTGTGGAGGTAAAGCAaacaaagaagagaataaGTGTGGCCCCAATGTCATTGATAAGCCACAGAGCATGGGAGAGAATTCGCCAATTATGTGTGGAACAAAAGATGAACTATCTTTCTCTATTGAGACTGAAACTGCACTAGAGAGTCCTTTAAGAAAGGCCCTCTCTCCCATCAACATCAATGGAAATCTAACAGCTTTTGTTGCAACACGTTCCAACAATGGGATTCAAAAGATTGGCACTCCACTTAGTAAATTCAGCACAAGAAGTTCCACACTAAAGAAttgtttggttcaagaatacattgatttCTTAAACAATGCTAGCAGAGATGAACTACTGGGATTAAAGGGAATAGGAGAGAAAACGGCAAAATACATAATAGAGCTTAGAGAGGAAAGTCCTATAAAATCTTTAAATGATCTGGAGAAGATTGGCCTCTCTTCCAAACAGGCCCATAACCTGTTCAAGAAAGCTGCAAGGACATTGTTTGAAGACAAGGCAGAAAGTTCAATGGCTACTTG 1913 0.4104 MATLSCTLNTPKTVKSCTPRKPSNPSSISKVRVIVRVRPFLPHEISARNHDPVPCVSVLDQDFESPEEIAVYLKDPETSRNECYQLDSFFGQEDNNVGEIFFREVSPFIPGIFNGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAVSMVLSICQNTGSTAHISYYEVYMDRCYDLLKVKAKEISILDDKDGQIHLRGLSQVPITTMSEFQEVFSSGVQRRKVAHTGLNDVSSRSHGVLVISVSTPSSDGTAATVNGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIFALNNNMPRVPYRESKLTRILQDSLGGTSHALMVACLNPGEYQESVHTVSLAARSRRISNFVPSAHKQETPKVNVDMEAKLRAWLESKGKTKSSQRLGPLKSPCWRQTPKSIISAKRSITHNGSVKGISTTNQEAAYTKERAFVVAFQNLLDEEDAFSSCLESHHCGGKANKEENKCGPNVIDKPQSMGENSPIMCGTKDELSFSIETETALESPLRKALSPININGNLTAFVATRSNNGIQKIGTPLSKFSTRSSTLKNCLVQEYIDFLNNASRDELLGLKGIGEKTAKYIIELREESPIKSLNDLEKIGLSSKQAHNLFKKAARTLFEDKAESSMAT 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00496 637 Pfam Kinesin motor domain 36 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva01g00496 637 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 15 635 - -
Bva01g00496 637 ProSiteProfiles Kinesin motor domain profile. 30 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 PANTHER BNACNNG40390D PROTEIN 15 635 - -
Bva01g00496 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 379 IPR027417 -
Bva01g00496 637 Gene3D Kinesin motor domain 27 396 IPR036961 -
Bva01g00496 637 SMART kinesin_4 28 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 Pfam Helix-hairpin-helix motif 568 588 IPR000445 GO:0003677
Bva01g00496 637 Gene3D - 554 626 - -
Bva01g00496 637 PRINTS Kinesin heavy chain signature 227 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 PRINTS Kinesin heavy chain signature 308 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 PRINTS Kinesin heavy chain signature 115 136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva01g00496 637 CDD KISc_KID_like 31 354 - -
Bva01g00496 637 SUPERFAMILY RuvA domain 2-like 562 620 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00496 Bva-Chr1 3884642 3889710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00496 30 395 Calmodulin-binding Proteins AT5G65930 32.181 1.24e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00496 K10403 - gmx:100804591 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00496 01 3884642 3889710 Bva01g00496 01 3884642 3889710 ECH