Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00493 ATGGGTAACAGCATCGGCAAGGTTTGCCTCTGCTCCACCGGCGCCGGAACCATCTCCTGCCGATACGAAAGCTCTTTCATCCCGTACGACAAAGCTCTTGGGAATTCCGTTTGCTATACCCGACCCGATCCCGCATATTCCTCTTGTTTTTCTGATGATGATAGCACCGCCCAGATGACTTTCCGATCAATATCCGGCGCCTCCGTGAGTGCTAACTCCTCCACTCGACCCTCCACCTCTCTCACCGATCCTCTTCAGCATAGTTTCGCTTTGGACTCAACGGCTTCGTTTGAGAGCTCCACTTCCTTCGCTGCAGTGCCTCTTCAACCTCGTCTTTCCTCCGTGGGTAGCTCCGGCACTGTCTCCGGCCCCATGGAATTCCGTTCTGGCCCTTTTGATCGTGGGTCGATTCCGAATCCCATTGAGAATGGCTCTGAGAACTCTGTTAAACTACAGAGGAGCTTCTCAAATGATGGGTACGGGTCCCAGATCACACCCAGTAAACCCAGtttgaaaaagatttttcGGCGAGCACTTTCCGGTACAATTTCACGCGGCCACCGATCAATCGTCACGCCTATCAAAGATGCAGTCTTGGCGGCTAGAATTGTGAATGCGATTGAGAGTGTTGGAAGCAATCAAAAGAGTAGCTTAAACGATACAGaggatgataataataatgaagatgatgatggtggtggtggtgatgCTTCAATGGAAGATGAGATTCAGAATCTTCACTGGGCTCAAGGGAGAGCAGGTGAGGATCGTGTTCATATTGTGATTTCTGATGATCATGGCTGGGTCTTCGTGGGGATCTATGATGGGTTTAACGGCCCTGATGCTTCTGACTTTCTTCTTGATAATCTCTTCTATGCTGTTCATAATGAGCTCAAGGCCAAGGGGCTATTCTATAATCAAAGAACAGAGAAACATCCAACAGTGATTGAAAAAGTTGGTCTCGAGAatagaaagaaggaaaatttgaGTTATGCAGAAGCCATTAGCCACTCAGATGTTCTGGAAGCTCTATCGGAGGCATTGAGGAAAACAGAGGATGCATTTTTGAAGACAGCTGATGAAATGATAACAAAAAACGCTGTGTTAGCTATGATGGGTTCTTGTGTTTTGGTAATGTTAATGAAGGGAGATGACATTTACTTGATAAATGTTGGGGACAGTCGCGCCGTCTTAGCGGAGGCCATGGAACATGATCTTAGTTTGTGGAAGAACCTTGAGGACATCAATGGGGACACGATTACCAGATTTTCCAATGTAAGATCCCTTCAGCTCACCATGGACCACAGCACACATGTTGAAGAGgaagtTCAGAGAATTAGAAGAGAGCACCCTGGTGACCCTTTTGCTATTTTAAGAGGCAGAGTCAAAGGTTTCTTGAATGTGACAAGGGCTTTTGGAGCTGGGTTTCTCAAGCAGCCAAAACATAACAATGCAGTACTAGAAACTTTCAGAGTGAACTACATAGGAGATTCTCCATACATCACTTGCTCCCCTTCACTTCATCACCACAGGCTCATTCCAAGTGACAAGTTCTTGATATTGTCTTCTGATGGACTTTACCAATATTTCACCAATGATGAAGCAGTTGCCAAAGTAGAATCATTCATCACTTTGTTTCCAGACAGAGATCCTGCACAACTTCTGGTTGAAGAACTTCTGTGCCGAGCTGCGAAAAAAGCTGGTATGGACTTTCATCAGTTGCTTGATATTCCACAAGGGCATCGACGAATTTACCACGATGATGTTTCCATTATCATCATCTcctttgagagaaaaatatggTGCTCATCGGTGTA 1817 0.4364 MGNSIGKVCLCSTGAGTISCRYESSFIPYDKALGNSVCYTRPDPAYSSCFSDDDSTAQMTFRSISGASVSANSSTRPSTSLTDPLQHSFALDSTASFESSTSFAAVPLQPRLSSVGSSGTVSGPMEFRSGPFDRGSIPNPIENGSENSVKLQRSFSNDGYGSQITPSKPSLKKIFRRALSGTISRGHRSIVTPIKDAVLAARIVNAIESVGSNQKSSLNDTEDDNNNEDDDGGGGDASMEDEIQNLHWAQGRAGEDRVHIVISDDHGWVFVGIYDGFNGPDASDFLLDNLFYAVHNELKAKGLFYNQRTEKHPTVIEKVGLENRKKENLSYAEAISHSDVLEALSEALRKTEDAFLKTADEMITKNAVLAMMGSCVLVMLMKGDDIYLINVGDSRAVLAEAMEHDLSLWKNLEDINGDTITRFSNVRSLQLTMDHSTHVEEEVQRIRREHPGDPFAILRGRVKGFLNVTRAFGAGFLKQPKHNNAVLETFRVNYIGDSPYITCSPSLHHHRLIPSDKFLILSSDGLYQYFTNDEAVAKVESFITLFPDRDPAQLLVEELLCRAAKKAGMDFHQLLDIPQGHRRIYHDDVSIIIISFERKIWCSSV 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00493 605 MobiDBLite consensus disorder prediction 213 239 - -
Bva01g00493 605 SMART PP2C_4 239 594 IPR001932 -
Bva01g00493 605 Pfam Protein phosphatase 2C 339 547 IPR001932 -
Bva01g00493 605 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bva01g00493 605 MobiDBLite consensus disorder prediction 223 237 - -
Bva01g00493 605 PANTHER PROTEIN PHOSPHATASE 2C 28 305 IPR015655 GO:0004722|GO:0006470
Bva01g00493 605 CDD PP2Cc 253 596 IPR001932 -
Bva01g00493 605 MobiDBLite consensus disorder prediction 114 147 - -
Bva01g00493 605 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 325 605 - -
Bva01g00493 605 SUPERFAMILY PP2C-like 253 597 IPR036457 -
Bva01g00493 605 PANTHER PROTEIN PHOSPHATASE 2C 325 605 IPR015655 GO:0004722|GO:0006470
Bva01g00493 605 Gene3D - 210 601 IPR036457 -
Bva01g00493 605 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 28 305 - -
Bva01g00493 605 ProSiteProfiles PPM-type phosphatase domain profile. 237 596 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00493 Bva-Chr1 3870760 3873546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00493 1 605 PP2C-type Phosphatase Gene Family AT2G28890 49.401 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00493 - K01102 twl:119986857 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00493 01 3870760 3873546 Bva01g00493 01 3870760 3873546 ECH