Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva01g00484 | ATGGTTTTTACCTCCATCCCAGCTTATCTTGATCCAGCCAACTGGCAACAACAGCAACCGAGTCATCAAAGTGGAAGCAGCGGCCTGAGTTCTCAGCTTCTTCCACCACTACCGGCACCGGCACCGGCACCACCCACGCAACCTCATGGTGCCAGTGGCACGGGCTCCATCAGGCCAGGGTCTCTGGCTGATCGAGCCCGTTTGGCTAACATACCTATGCCAGAGACTGCGCAAAAATGCCCACGATGTGATTCCACAAACACCAAGTTTTGCTACTTCAACAACTACAGCCTCTCGCAGCCAAGGCACTTCTGCAAGACCTGCAGAAGGTACTGGACAAGAGGCGGGGCCTTGAGAAACGTCCCCGTGGGAGGCGGCTGCCGGAGGAACAAGAGAACCAAAGGAAGCAGCAGCTCAAAGTCTCCGGCAAGCTCGGATCGCCAAACGGGTAGCGCTAGTTCAACAAACTCAGCCTCTTCTAACAGCGGTTCTGCTGCTGATATAGTAGGTCTCGGACCTCAGGTTCCACCGCTCAGGTTCATGGCCCCGCTACATCAACTAACGGATTTTGCTGCTGGAGACATTGCCTTAAACTATGGCCTCAATTACAGCACAATTTCAGCGCCAATGGGGGGAGTAGGTgacttaaattttcatataggTGGTGCTTTAGGTGGCGGAGCAAGTGGCGGCAACGGTGGTGCCGGTGGCAGCTCTATCTTCTCAGCAGCTGGATTGGAACAATGGCGGGTGCCACAAACACAGCAATTTCCACTTCTAGCTGGCTTGGAAGGTTCACATGGGTTGTACCAATTTGAAGGTGGTGCTGAGGGACCGGGATATGGCGGTGCTGCTGGCACAGCGGCTCAGGTCCGGCCAAGGGCAACTACTTCCGGGCTGATAAGCCAGCTGGCTTCAGTGAAAATGGAAGACAATCGGGAACTGAATTTGTCAAGACAGTTCTTGGGAGGAATCAGTAATCCAGCTGGGAGTGAGCAGTATTGGAGTGCTAACACTGGTGCTACAGCAGCGTGGACAGATCTCTCTGGGTTTAGTTCTTCCTCCACTACCAGCAATcaattata | 1085 | 0.529 | MVFTSIPAYLDPANWQQQQPSHQSGSSGLSSQLLPPLPAPAPAPPTQPHGASGTGSIRPGSLADRARLANIPMPETAQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKGSSSSKSPASSDRQTGSASSTNSASSNSGSAADIVGLGPQVPPLRFMAPLHQLTDFAAGDIALNYGLNYSTISAPMGGVGDLNFHIGGALGGGASGGNGGAGGSSIFSAAGLEQWRVPQTQQFPLLAGLEGSHGLYQFEGGAEGPGYGGAAGTAAQVRPRATTSGLISQLASVKMEDNRELNLSRQFLGGISNPAGSEQYWSANTGATAAWTDLSGFSSSSTTSNQL | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva01g00484 | 361 | MobiDBLite | consensus disorder prediction | 122 | 165 | - | - | |
Bva01g00484 | 361 | ProSiteProfiles | Zinc finger Dof-type profile. | 78 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Bva01g00484 | 361 | MobiDBLite | consensus disorder prediction | 13 | 33 | - | - | |
Bva01g00484 | 361 | MobiDBLite | consensus disorder prediction | 13 | 60 | - | - | |
Bva01g00484 | 361 | ProSitePatterns | Zinc finger Dof-type signature. | 80 | 116 | IPR003851 | GO:0003677|GO:0006355 | |
Bva01g00484 | 361 | Pfam | Dof domain, zinc finger | 77 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Bva01g00484 | 361 | PANTHER | DOF DOMAIN ZINC FINGER PROTEIN | 13 | 357 | - | - | |
Bva01g00484 | 361 | MobiDBLite | consensus disorder prediction | 136 | 165 | - | - | |
Bva01g00484 | 361 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 13 | 357 | IPR045174 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva01g00484 | Bva-Chr1 | 3814383 | 3816110 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva01g00484 | 1 | 338 | C2C2-Dof Transcription Factor Family | AT5G02460 | 41.397 | 4.78e-61 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Bva01g00484 | zf-Dof | 7.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva01g00484 | - | - | rcu:8279572 | 386.726 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva01g00484 | 01 | 3814383 | 3816110 | Bva02g01329 | 02 | 17088344 | 17090090 | BWGD | |
Bva01g00484 | 01 | 3814383 | 3816110 | Bva01g00484 | 01 | 3814383 | 3816110 | ECH |