Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00482 ATGCCGAGGCAGGGCTTGAGCAACCAAATGCCGAGGCAATCTTTCGTCCTTCTCAACCTTCACCACCACTTTTTTCTGCagctttctctcttcttcttcttcttcatccttGTTATTCATTTTGCTTCTTCTACTGCTAATAATGATGCTCACGTTCTGCTTTCATGGGTTCATAGCTCCTCCTCTAAAGTTCCTTCTGCTTTTTCTGATTGGAACCCTTTGGACTCTAGCCCTTGTAATTGGTCTCACATCAAGTGCTCTGTAGAGAACTTTGTGACTGAGATTGAAATCCGAGGAACTGAGCTAGCTCTTCCCTTTCCTTCCAACATTTCTTCCCTCCCTTTCCTTCAAAGGCTTGTCATTTCTGAGGCTAATCTCACTGGAGTTATCTCACCTGATATTGGAAACTGCCCTGAGCTTGTAGTCATTGACTTAAGCTCAAATAGTCTTGTGGGTAACATTCCTTCAACTATTGGGAACCTCCAAAACCTCCAAGATTTGACCTTGAACTCTAACCAGCTCACTGGTAAAATCCCACCCGAGATTGGTGCTTGTGTTAGCCTTAAGAACCTCAACATATTTGATAACAATCTTAGTGGGGTTCTTCCAGCTGAGTTGGAAAAACTCTCAAATCTGGAGATTATACGTGCGGGAGGAAACAAGGATATTGAAGGGAAGATTCCAGATGGGCTTGGAGATTGCAGGAATTTGACAATATTGGGTCTTGCTGACACTAAAATTTCTGGTTCAATTCCTTCTTCATTGGGAAAACTGAGCATGCTTCAAACTATCTCCATTTATGGTACTATGCTCTCTGGTGAGATTCCACCTGAAATAGGCAACTGTTCAGAGCTTGTGAACTTGTTTTTATATCAGAATGATCTCTCAGGTTCACTACCAAGAGAGCTAGGCAGGCTTCAGAAGCTGGAGAAGATGTTATTGTGGCAGAACAACTTTGTTGGGAGCATTCCTGAGGAAATTGGAAACTGCAGGAACTTGAAGATTCTTGATATCTCCTTAAATTCTTTCTCTGGAGGCATTCCTAGAACTTTGGGAAACCTCTCAAACCTTGAAGAGCTTATGCTAAGTAACAATAACATCTCTGGTTCAATACCACCAGATATTTCTAAACTTCAAAATCTAATACAGCTGCAGTTAGATACTAACGGGCTATCAGGTTCAATTCCAGCTCAGCTTGGAGGGCTGAGAAAGCTTACAGTCTTTTTTGCTTGGCAGAATAACCTTGAAGAAAGCATTCCATCGACATTGGGTGGATGTGTAAGCCTTGAATCTCTAGATTTGTCATACAATGCTCTCACTGGTAGATTACCCCCTAGCCTATTTGAGcttcaaaatttaacaaagtttCTAGTAATCTCTAATGATATTTCTGGTCCCATCCCCCCTGAGATTGGTAAATGCAGCTCTCTTATTCGACTCAGGCTtgtaaacaacaaaattagtGGAACAATACCTAGAGAAATTGGATTCCTTAATAGTCTTAGCTTTCTTGATCTATCTGAAAATCATCTCACTGGGCCAATTCCAAATACAATTGGGAATTGCAAAGAACTGCAAATGCTGAATCTGAGCAATAATTCCCTTTATGGTGCACTGCCTGATTCTTTATCTTCTCTCACAAAGCTTGAGGTTTTGGATGTTTCTATGAATCACTTGTTTGGTGAGCTCCCAACGAGTATAGGCCAACTCACTTCACTTCTTAGGCTCATTCTTGGAAAAAATTCATTCTCTGGATCAATACCCTCCTCAATAGGGCACTGTTCAGGTCTCCAACTGATAGATCTTAGCAGCAACAATTTCTCAGGGAGCATCCCAGCTGATCTCTTTAAAATTGAAGGACTTGGCATTGCTCTAAATTTGAGTCACAATTCATTATCTGGTCTTGTCCCACCACAAGTTTCTGGTCTGGACAAGCTGTCTATACTGGACCTTTCACACAATCAGCTTGAAGGTGATCTCATGGCGTTTTCAGGGCTTGAAAATCTTGTTTCTCTCAATATCTCTTACAACAAGTTCACTGGTTATCTTCCTGACAGCAAGTTATTCCATCAATTATCAGCAACAGATTTGGAAGGAAATCAGGGATTATGTCCTAACGGTCACAATTCTTGCTTCATTAGAAATGATGCAATTGCAAGAATGCATAGTAGTGATTCTAAGATCAAACTGGCCATTGGATTGCTCAGTTCCTTGACTGTTGTAATGGCAATTTTTGGAGTCTTTACAGTCTTTCTAGCAAGGAAGATGGTTCGAGAAGACAGTGACTATTTTGGGCTTGCCAAACTTGTTGACAATGGAGACTTTGTGCAATCTTCGTGCACACTAGCAGGCTCCTATGGTTACTTTGCTCCCGAGTATGGTTATATGATGAAGATAACAGAGAAAAGTGATGTGTATAGTTATGGCATTGTTGTATTAGAAGTCTTGACCGGGAAGGAACCAATTGATCCAACAATACCAGATGGACTTCATATTGTTGACTGGGTAAGACGGAAAAGAGGTGGAGTTAAGGTCCTTGATCCAAGCTTGCGCGCCCGGCCGGAATCTGAGATTGAGGAAATACTGCAAACGCTAGGTGTGGCTTTACTCTGTGTAAATCCCTGCCCAGATGATAGACCAACCATAAAAGATGTAGCAGCAATGCTCAAAGAAATTAGGCAGGACAAAGAGGAGTACAAGAAAGTTGACATGCTTCTTGGTGGATCCTCTGCAGCAAATGATCAAACAGATAGCAATCACTCACCCATGTTTTTATA 2777 0.4062 MPRQGLSNQMPRQSFVLLNLHHHFFLQLSLFFFFFILVIHFASSTANNDAHVLLSWVHSSSSKVPSAFSDWNPLDSSPCNWSHIKCSVENFVTEIEIRGTELALPFPSNISSLPFLQRLVISEANLTGVISPDIGNCPELVVIDLSSNSLVGNIPSTIGNLQNLQDLTLNSNQLTGKIPPEIGACVSLKNLNIFDNNLSGVLPAELEKLSNLEIIRAGGNKDIEGKIPDGLGDCRNLTILGLADTKISGSIPSSLGKLSMLQTISIYGTMLSGEIPPEIGNCSELVNLFLYQNDLSGSLPRELGRLQKLEKMLLWQNNFVGSIPEEIGNCRNLKILDISLNSFSGGIPRTLGNLSNLEELMLSNNNISGSIPPDISKLQNLIQLQLDTNGLSGSIPAQLGGLRKLTVFFAWQNNLEESIPSTLGGCVSLESLDLSYNALTGRLPPSLFELQNLTKFLVISNDISGPIPPEIGKCSSLIRLRLVNNKISGTIPREIGFLNSLSFLDLSENHLTGPIPNTIGNCKELQMLNLSNNSLYGALPDSLSSLTKLEVLDVSMNHLFGELPTSIGQLTSLLRLILGKNSFSGSIPSSIGHCSGLQLIDLSSNNFSGSIPADLFKIEGLGIALNLSHNSLSGLVPPQVSGLDKLSILDLSHNQLEGDLMAFSGLENLVSLNISYNKFTGYLPDSKLFHQLSATDLEGNQGLCPNGHNSCFIRNDAIARMHSSDSKIKLAIGLLSSLTVVMAIFGVFTVFLARKMVREDSDYFGLAKLVDNGDFVQSSCTLAGSYGYFAPEYGYMMKITEKSDVYSYGIVVLEVLTGKEPIDPTIPDGLHIVDWVRRKRGGVKVLDPSLRARPESEIEEILQTLGVALLCVNPCPDDRPTIKDVAAMLKEIRQDKEEYKKVDMLLGGSSAANDQTDSNHSPMFL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00482 925 ProSiteProfiles Leucine-rich repeat profile. 356 378 IPR001611 GO:0005515
Bva01g00482 925 Coils Coil 882 902 - -
Bva01g00482 925 Gene3D Ribonuclease Inhibitor 300 397 IPR032675 -
Bva01g00482 925 Pfam Leucine rich repeat N-terminal domain 46 87 IPR013210 -
Bva01g00482 925 Gene3D Ribonuclease Inhibitor 402 714 IPR032675 -
Bva01g00482 925 Pfam Protein kinase domain 764 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00482 925 Pfam Leucine Rich Repeat 356 378 IPR001611 GO:0005515
Bva01g00482 925 Pfam Leucine Rich Repeat 428 447 IPR001611 GO:0005515
Bva01g00482 925 Pfam Leucine Rich Repeat 332 354 IPR001611 GO:0005515
Bva01g00482 925 PRINTS Leucine-rich repeat signature 643 656 - -
Bva01g00482 925 PRINTS Leucine-rich repeat signature 429 442 - -
Bva01g00482 925 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 764 907 - -
Bva01g00482 925 SMART LRR_sd22_2 354 383 - -
Bva01g00482 925 SMART LRR_sd22_2 546 572 - -
Bva01g00482 925 SMART LRR_sd22_2 643 668 - -
Bva01g00482 925 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 19 762 - -
Bva01g00482 925 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 764 907 - -
Bva01g00482 925 SUPERFAMILY Protein kinase-like (PK-like) 764 904 IPR011009 -
Bva01g00482 925 ProSiteProfiles Protein kinase domain profile. 597 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00482 925 Gene3D Transferase(Phosphotransferase) domain 1 745 910 - -
Bva01g00482 925 Gene3D Ribonuclease Inhibitor 201 299 IPR032675 -
Bva01g00482 925 Gene3D Ribonuclease Inhibitor 45 200 IPR032675 -
Bva01g00482 925 SUPERFAMILY RNI-like 119 492 - -
Bva01g00482 925 SUPERFAMILY L domain-like 461 704 - -
Bva01g00482 925 SMART LRR_typ_2 161 185 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 498 522 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 402 426 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 643 665 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 354 378 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 546 570 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 427 450 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 666 691 IPR003591 -
Bva01g00482 925 SMART LRR_typ_2 306 330 IPR003591 -
Bva01g00482 925 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00482 Bva-Chr1 3797967 3802023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00482 764 908 Receptor kinase-like Gene Family AT5G56040 53.205 4.73e-40 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva01g00482 Pkinase 2.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00482 - - gmx:100815339 1087.02