Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00475 ATGTTGCCTCCATTGACCATGGATGATTTCAAGGATCGCCAAATAGACCCAAACTGGTCTCCTTTTCGGATGCTGCTTGAGATTGCTGAAGTGGAAGAACAGAAACTACAGCAACTTCAAAGAAGTTCCGACAGCGAAATTCATGTCTGCGTAGGTGTTGCTGCTAAAGACAATAATTCCAAGAAATCTGATGAGCCAAACCCAGTTGGAGTTGCTGTTGCTGAAGCCAATAATACTGGCAAGAAACGCCGCAGGGTtcggaaattaaaaaatgcgTCAAACAAGAATGTTTATGATCATGGTGGTATTACTGTGGAAGCTGATTCCAGAAATTCTGAGCCAAACCCAGTTGCTGAAATCTCTAAAGAACTCATTTACAACGAAAGATCTCTGTGTCTGGAGAAGAAGCCCAATAACGAAACCCTTAGAAACCCTAACCCTGACGACAACAATGGCAAGAGACCTTTGGTTCTGAAACTGAAGAGAAGTATTgttgttgatgatgatgaagaagacgACTGGGTTTCTAGTAGTTCCACGAAAGCAAAGAATGAATCAATACCCACTACTTCTAATTCCAATCCCAGACTGAATAGGCAATCCCAGCTACCACCACCACCATTGGCCAAGGAATTCatgatgaagaaaatcaaTGAACTGGGTGGCACTGAGATAACTTTGTTAATCCAAAAGTCTCTCTTCTGGACAGATTTAAGCCAGCAACACAACAGACTCTCCATGCCTATAAAGCAAATGAAGACTGATGAGACGTTCTTGCGAGAATTTGAGCTTCAACTTCTCGAGATCAAAGAGAACCGATATGAAATGATAGTGCCATTGCTTCAACCTTCCTCCCTTAAGGTCTGGGAGAGTGAAATAATTTTGGCAAGATGGAAAATGAACAATATCTCTATGTATATTCTTAGAGGAACTTGGTTTCGTATGGCTAAAGCCAATGATCTTAAAAAGAATGATGTTGTTCAAGTTTGGTCATTCAGGGTTGAAGGCCAGTTGTGGATTGCTCTGATTAAACTTTG 1037 0.3925 MLPPLTMDDFKDRQIDPNWSPFRMLLEIAEVEEQKLQQLQRSSDSEIHVCVGVAAKDNNSKKSDEPNPVGVAVAEANNTGKKRRRVRKLKNASNKNVYDHGGITVEADSRNSEPNPVAEISKELIYNERSLCLEKKPNNETLRNPNPDDNNGKRPLVLKLKRSIVVDDDEEDDWVSSSSTKAKNESIPTTSNSNPRLNRQSQLPPPPLAKEFMMKKINELGGTEITLLIQKSLFWTDLSQQHNRLSMPIKQMKTDETFLREFELQLLEIKENRYEMIVPLLQPSSLKVWESEIILARWKMNNISMYILRGTWFRMAKANDLKKNDVVQVWSFRVEGQLWIALIKL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00475 345 MobiDBLite consensus disorder prediction 179 199 - -
Bva01g00475 345 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 55 345 - -
Bva01g00475 345 MobiDBLite consensus disorder prediction 78 116 - -
Bva01g00475 345 Pfam B3 domain-containing protein At2g31720-like 213 313 IPR005508 GO:0003677
Bva01g00475 345 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 55 345 IPR005508 GO:0003677
Bva01g00475 345 MobiDBLite consensus disorder prediction 136 156 - -
Bva01g00475 345 MobiDBLite consensus disorder prediction 169 207 - -
Bva01g00475 345 SUPERFAMILY DNA-binding pseudobarrel domain 227 342 IPR015300 -
Bva01g00475 345 Gene3D - 210 344 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00475 Bva-Chr1 3753435 3754472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00475 217 342 B3 DNA Binding Superfamily AT1G05930 29.771 1.05e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00475 - - lang:109335527 115.931