Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00474 ATGCATCGTATTCAGAAGCTAAGAGGCCCTTTTCAACACTTTCGCTCACATAACAATGAATTGCTTCAATCTTTTGCTTTAGTGAATAACTTGTCCACCACAGCTGGGAAGGTGATTCCCTGCAAAGCTGCGGTTGCTTGGGAAGCAGGGAAGCCATTGGTGATTGAGGATGTTGAGGTTTCTCCACCACAAGAGAAGGAGGTGAGAATCAAGATCAAATATTCTTCCCTTTGCCATACTGATCTCGTCTACTGGGAATCCAAGGGATTGCCACCAATCTTTCCTCGCATATTAGGCCATGAAGCAGCAggCATTGTGGAGAGTGTTGGGAAAGATGTATCAGATTTCAAGCCTGGGGATCATGTGCTTCCGGTGTTCACCGGGCAGTGTGGAGAATGCCCGCATTGCAATTCTGAAGAGAGCAATATGTGTGACTTGTTGAGAATAAACCCAACAAGAGAGGTGATGATCAGTGATGGCAAATCTAGGTTCTCTATTAATGGCAAACCTGTAAGCCACTTTCTTGGCACATCCACCTTTAGCCAGTACACTGTTGTTCATTCAGGATGCCTAGCAAAGATTGACCCTCAAGCTCCTTTAGATAAAGTGTGCGTCCTCAGTTGTGGCATCACAACAGGATTAGGAGCAACTCTAAATGTTGCCAAACCAAATAAGGGTTCTTCAGTGGCAATCTTTGGGCTTGGAGCAGTTGGACTAGCAGCTGCTGAAGGTGCAAGAATTGCTGGGGCTTCTAGGATCATTGGCATTGACTTGAACCCAAGCAAATTTGAACAAGCGAAAATATTCGGAGTAAATGAGTTTGTGAATCCAAAGGAACATAACAAACCAATTCATGAGGTCCTCACAGAGCTAACAAATGGTGGAGTTGATAGGAGTATAGAGTGCACAGGAAACATCAACAGCATGATATCTGCTTTTGAAGCTGTCCATGATGGATGGGGTGTTACTGTCATTGTTGGAGTACCAAGAGCAGATGCGGTTTTCAAGACCaatccctttctttttcttaatgagAGAACGATTAAAGGCACTGTTTTTGGAAACTACAAGCCCAAGAGAGATCTCCCAACTCTTGTTAACATGTACATGAAAAATGAATTGAAGTTGGAAAAGTTCATAACACACAGAGTTCCTTTCTCGGAAATCAATAGAGCATTTGATCACATGATCAAGGGTCAGAGCTTGCGAACCATCATTGATATGGAAGGCTA 1232 0.4278 MHRIQKLRGPFQHFRSHNNELLQSFALVNNLSTTAGKVIPCKAAVAWEAGKPLVIEDVEVSPPQEKEVRIKIKYSSLCHTDLVYWESKGLPPIFPRILGHEAAGIVESVGKDVSDFKPGDHVLPVFTGQCGECPHCNSEESNMCDLLRINPTREVMISDGKSRFSINGKPVSHFLGTSTFSQYTVVHSGCLAKIDPQAPLDKVCVLSCGITTGLGATLNVAKPNKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPSKFEQAKIFGVNEFVNPKEHNKPIHEVLTELTNGGVDRSIECTGNINSMISAFEAVHDGWGVTVIVGVPRADAVFKTNPFLFLNERTIKGTVFGNYKPKRDLPTLVNMYMKNELKLEKFITHRVPFSEINRAFDHMIKGQSLRTIIDMEG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00474 410 Pfam Alcohol dehydrogenase GroES-like domain 66 192 IPR013154 -
Bva01g00474 410 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 99 113 IPR002328 GO:0008270|GO:0016491
Bva01g00474 410 CDD alcohol_DH_plants 39 407 - -
Bva01g00474 410 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 33 408 - -
Bva01g00474 410 PANTHER ALCOHOL DEHYDROGENASE 33 408 - -
Bva01g00474 410 SUPERFAMILY GroES-like 359 406 IPR011032 -
Bva01g00474 410 SUPERFAMILY GroES-like 34 217 IPR011032 -
Bva01g00474 410 Gene3D - 49 400 - -
Bva01g00474 410 Pfam Zinc-binding dehydrogenase 236 367 IPR013149 -
Bva01g00474 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 199 372 IPR036291 -
Bva01g00474 410 SMART PKS_ER_names_mod 50 406 IPR020843 GO:0016491
Bva01g00474 410 Gene3D - 213 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00474 Bva-Chr1 3746747 3750252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00474 67 409 Monolignol Biosynthesis Gene Families AT1G72680 24.286 3.18e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00474 K18857 - nnu:104602143 599.742