Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00451 ATGAGTTGcttttcatgtttttcttcCCACGAGAAGAAATCATCAAAGCGACCATCCAACAATGGCATGAAGGTGCAAAAGCCTGAACCTCAAGGAGAAATAATCCAGCCAAAGCCAAAACCTGCAGCATTTGATGCTTCAAACGCCACCCTACCACCAAAggctaaaatagaaaatggaaacaaagaGAATATTGGCAACAATAACATTGCTGCACAAACTTTCACCTTCAGGGAACTGGCTGCGGCAACCAAGAACTTCCGCCAAGAATGCCTAATAGGTGAAGGTGGATTTGGGAGAGTTTATAAAGGCCGACTGGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTACACAATCAAAATCTGGTGAATTTAATTGGGTATTGTGCTGATGGTGAGCAGAGACTATTGGTCTATGAATACATGCCATTGGGATCTCTAGATGACCATCTTCTTGATCTGCTTCCACAGAAAACTCCACTAGATTGGTTCACCAGAATGAAGATAGCACTGGGAGCTTCTAAGGGTCTTGAATATTTACATGATAAAGCCAATCCCCCTGTAATCTACCGGGACTTGAAATCCTCCAACATCTTGTTGGACAATGATTACAATGCAAAGCTATCAGATTTTGGACTAGCCAAGCTCGGACCTACTGGTGACAAGTCTCATGTGTCTTCAAGAGTAATGGGAACTTATGGATATTGTGCGCCAGAATATCAAAGAACTGGTCAACTCACAGTAAAATCAGATGTATATAGTTTTGGAGTTGTTTTATTAGAACTTATCACCGGAAAAAGAGTCATTGACGTTACAAGGCCAACAAGGCAGCAAAATCTAGTTTCTTGGGCAAAACCATTCTTCAAAAACCCTAGTAGATACCCAGAACTAGCTGATCCCAAACTCAAAGGAGCTTTTCCAGCTAGAGCACTGAATCAAGCAGTGGCAGTGGCAGCAATGTGCCTGAACGAGGAACCATCAGTCCGGCCTTTAATCAGCGACGTAGTCACTGCTCTAAGTTTCCTTGGAACATGTCCAGAAACTCCGGGCAGTGCTTTCGGTCCCATCACCATTCCCTCTCCATCATCTGATGATCAAGAATTTGCTGCAACCAAAGGAAATGATGTTATTCTTATTGATGATGACGATGATAGTGATGAATCCGATGATAGTATTCTTCTTGATCGCAAAAATGCCGTTGCAGACGCCACGGAATGGGGCTCAACTTCTAGGGCCGACGCTCAATCTCGACCTGGAAGTGCTACCTCTTTGTA 1340 0.4224 MSCFSCFSSHEKKSSKRPSNNGMKVQKPEPQGEIIQPKPKPAAFDASNATLPPKAKIENGNKENIGNNNIAAQTFTFRELAAATKNFRQECLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHNQNLVNLIGYCADGEQRLLVYEYMPLGSLDDHLLDLLPQKTPLDWFTRMKIALGASKGLEYLHDKANPPVIYRDLKSSNILLDNDYNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRVIDVTRPTRQQNLVSWAKPFFKNPSRYPELADPKLKGAFPARALNQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTCPETPGSAFGPITIPSPSSDDQEFAATKGNDVILIDDDDDSDESDDSILLDRKNAVADATEWGSTSRADAQSRPGSATSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00451 446 Pfam Protein kinase domain 89 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00451 446 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00451 446 Gene3D Phosphorylase Kinase; domain 1 57 163 - -
Bva01g00451 446 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 1 438 - -
Bva01g00451 446 PANTHER OS07G0668900 PROTEIN 1 438 - -
Bva01g00451 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Bva01g00451 446 MobiDBLite consensus disorder prediction 425 446 - -
Bva01g00451 446 MobiDBLite consensus disorder prediction 1 48 - -
Bva01g00451 446 SUPERFAMILY Protein kinase-like (PK-like) 73 381 IPR011009 -
Bva01g00451 446 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Bva01g00451 446 CDD STKc_IRAK 93 361 - -
Bva01g00451 446 SMART serkin_6 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00451 446 Gene3D Transferase(Phosphotransferase) domain 1 164 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00451 Bva-Chr1 3612952 3616612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00451 1 438 Glycoside Hydrolase AT3G07070 64.334 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva01g00451 Pkinase 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00451 - - gmx:100786405 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00451 01 3612952 3616612 Bva01g00451 01 3612952 3616612 ECH
Bva01g00451 01 3612952 3616612 Bva09g00188 09 919551 922954 ECH
Bva01g00451 01 3612952 3616612 Bva07g02456 07 19805407 19808353 ECH