Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00429 ATGGCTTCCCCACCCTCCCCTAAacccttttcttctctcactACCTCCTCTTCTGCCGCCGCCGCCGCTTCGCCCTCTAAGAAATCTCAACCAATCCCTTGGACCCACCAGGAAACAGTCAATCTCATCCGAGCCTACCAAGAGAAATGGTACTCCCTGAAGCGGGGCCAGCTCAGGGCCAGCCAGTGGGAAGAGGTGGCGGTCACCGTCGCCGCCCGGTGCGGATACGACTACAACGAGCCGTCAAAGTCCGCCGTCCAGTGTCGTCATAAGATGGAGAAGCTCCGACAGCGGTACCGGGCTGAGAAGCACCGTGTTGCTTCATCCGGCGGCTCTTGTGGGTGGCAATACTTTGACCTTATGGATCAATTGGAGCGTGGGCCTATGCCTATTTCTGCAAGACCCCTTGTTTCATTGGTCCCCTTCAACTTTGGCGGCGGCGATGAggaggaagatgaagatgatgaagaagatgaggaCATCGATAGAGAGAACTATAGCAAGTCAAGGAGTATTTCTCATATTCTTAGCCAGCAACAGCAACCCGCTGCCAAATTTGGTAGAATTTCAGAGTTTTATGGTCACCCAGTAGGAAAAAAGAGGTGGATTATGTCAGGGGAGGAAGAGTATGAGGAGGAAGAAGGAGTTTCAGCTATGAAAGGAGGAGAATTGGTATCTGGGTTAGCTGCTGAGATAAAGGGTTTTGCAGAGAGGTTTATCGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACTGTGAGGTGTAGATTGGAGATGGAGAATAAACGGATCGAGATGATCCTTGAATCGCAACAAAGGATTGTTGATTCCATTGGAAGGGCATTTGGGTCTTCAAAGAGGATGAAAATAAGCCAAGAAATCTG 887 0.4746 MASPPSPKPFSSLTTSSSAAAAASPSKKSQPIPWTHQETVNLIRAYQEKWYSLKRGQLRASQWEEVAVTVAARCGYDYNEPSKSAVQCRHKMEKLRQRYRAEKHRVASSGGSCGWQYFDLMDQLERGPMPISARPLVSLVPFNFGGGDEEEDEDDEEDEDIDRENYSKSRSISHILSQQQQPAAKFGRISEFYGHPVGKKRWIMSGEEEYEEEEGVSAMKGGELVSGLAAEIKGFAERFIGMENLKMEMMKETVRCRLEMENKRIEMILESQQRIVDSIGRAFGSSKRMKISQEI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00429 295 Pfam Myb/SANT-like DNA-binding domain 33 124 IPR044822 -
Bva01g00429 295 ProSiteProfiles Myb-like domain profile. 33 96 IPR001005 -
Bva01g00429 295 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 292 - -
Bva01g00429 295 MobiDBLite consensus disorder prediction 146 162 - -
Bva01g00429 295 MobiDBLite consensus disorder prediction 144 174 - -
Bva01g00429 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 292 IPR044823 -
Bva01g00429 295 MobiDBLite consensus disorder prediction 1 34 - -
Bva01g00429 295 Gene3D - 34 101 - -
Bva01g00429 295 SMART 118neu2 41 129 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00429 Bva-Chr1 3492868 3494207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00429 34 124 Trihelix Transcription Factor Family AT3G14180 36.264 2.41e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva01g00429 Myb_DNA-bind_4 7.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00429 - - lja:Lj0g3v0196179.1 298.901