Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00426 ATGCAAGGTCGCCGGAGGATAACACTTTATGAACAAATGTCAGCAGGGGAAACTGGCCGAAGCTTAGCCGGCTTGACCCTCCACGACGTATTAGCCAACAGAGAAGCCGCGCTGACTCAGCCCCATCAGCCGCCGCGCCAACGAACTCTTGTAGACATTATCCGAGAGGACGAGTCCACCAAGAAGGATAAAAAGACTTGGAAAGCCTTCAAGGACAAGCTTCGGCTCAAGCGCACCGGATCTACTTGGACCTCTTCAGTCCATATTCCAGCTTCGGATATTCTTAACCCTATCCAGTTTAACAACACCAACAGCAACAGAGCCCATTCCCGGGTCTCCCGTGGTAACACGGACGCGTCAACTCATCACATGGATTCTCGCCAAGTCCAAGACATAAACCCAACGGATCCGGATTCAGGTCCGACAACCCGACCCCAGTTCTCGCGCGGGATCTCCTCTCGTTACGACCCGACTGGCGGCGATCCCACTGAGGATAAATTCAAACACTCAATCAAGCGCAACAGCTCCACACGCTTGGCGGGGAGTACCGAGTCGATCCGACGAGAACGCGTGGTGACTTTCCGGGAACCCTACGACAGTGACGATGGTGGATCCTCCGACGACGAGGAGGATTTGGCCCAACCATTAAGAGAAGTTAGAACTTTATCAGCCCGAGAGGCGGTGGCAGCTCAGGAGGCGGCGGAGGCAGCAGCTGCGGCAGAGGCGGAGGAGGAGGCGGCAGAGGCAGAGCCGGTGAAAATGTCGCTGATGGATCTGCTTGAGGAGACTGATCGGCAAATGGGGTTGGAGGGCACGATGTATGGCGAATATGACTCAGACtatgatgatgaagaggaagaagaggaggaggaaAAAACCACTGTGGAGTGTACTTGCTGCGTCTGCATGGTGAGGCATAAAGGTGCGGCCTTTATACCATGTGGGCACACGTTTTGCAGGATGTGTTCAAGGGAGCTTTTGGTGAGCAGGGGGAATTGCCCACTTTGCAACAATTTCATTGTGGAAATTCTTGACATTTTCTG 1043 0.5244 MSAGETGRSLAGLTLHDVLANREAALTQPHQPPRQRTLVDIIREDESTKKDKKTWKAFKDKLRLKRTGSTWTSSVHIPASDILNPIQFNNTNSNRAHSRVSRGNTDASTHHMDSRQVQDINPTDPDSGPTTRPQFSRGISSRYDPTGGDPTEDKFKHSIKRNSSTRLAGSTESIRRERVVTFREPYDSDDGGSSDDEEDLAQPLREVRTLSAREAVAAQEAAEAAAAAEAEEEAAEAEPVKMSLMDLLEETDRQMGLEGTMYGEYDSDYDDEEEEEEEEKTTVECTCCVCMVRHKGAAFIPCGHTFCRMCSRELLVSRGNCPLCNNFIVEILDIF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00426 335 MobiDBLite consensus disorder prediction 114 141 - -
Bva01g00426 335 Coils Coil 218 238 - -
Bva01g00426 335 MobiDBLite consensus disorder prediction 171 189 - -
Bva01g00426 335 Pfam Zinc finger, C3HC4 type (RING finger) 285 328 - -
Bva01g00426 335 MobiDBLite consensus disorder prediction 88 200 - -
Bva01g00426 335 ProSiteProfiles Zinc finger RING-type profile. 287 325 IPR001841 -
Bva01g00426 335 SUPERFAMILY RING/U-box 286 331 - -
Bva01g00426 335 PANTHER OS01G0917900 PROTEIN 6 335 - -
Bva01g00426 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 335 IPR013083 -
Bva01g00426 335 MobiDBLite consensus disorder prediction 88 103 - -
Bva01g00426 335 CDD RING-HC 287 324 - -
Bva01g00426 335 PANTHER OS01G0917900 PROTEIN 6 335 - -
Bva01g00426 335 SMART ring_2 287 324 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00426 Bva-Chr1 3466353 3467396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00426 9 335 C3H Transcription Factor Family AT3G07120 35.519 9.79e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00426 - - gmx:100795449 270.396