Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00416 ATGTGCTCATTGTCCTATATATTTATAGGTCTTGGAATAAGCCTTGGATCAGTTTCATTACTGATTGTTGGATGGTggttatacaaaattataaagaaaagaagggaaaagaaactgaaagaaaaatacttcCAACAAAACGGTGGTTTGTTGTTACAGCAAAAATTATCCTCTAGTCCTGAATTCAATGTCGATATAATCAAACTATTCAAGCTAGAGGACTTGGAGAAGGCCACTGATCACTTTAATGCAGATAGAGTTTTAGGAAAAGGAGGACAAGGTACAGTTTACAAAGGAATGCTTGCAGATGGTAAAATTGTTGCAGTGAAGAAGCTGAAAGTTCATGGAAATGTTGAAGACTTTATTAATGAGATTGTTATTCTTGCTCAAATTAATCATAGAAATGTAGTCAAGTTATTGGGGTGTTGTTTGGAGGCAGAATTTCCTTTGTTAGTTTATGAGTTCATTCCTAATGGGACCCTTTTTTATCATCTccatgaagaaaatgaagagttaCCAATGACATGGGATATGCGTTTAAGAATCGCTGTTGAAGTCGCTGGAgctctattttatttacactCCGCTGCTTCCCAACCTATTTATCATCGAGATATCAAGTCCACAAATATACTACTGGATGAAAAGTATAGGGCAAAAGTTGCTGACTTTGGAGCATCTAGATTGATGTCTAATATTGAAGTTACTCATGTCACTACACGAGTTCATGgaacttttggttatttagaTCCTGGGTATTATTATACGGGTCAATTGACAGAAAAAAGTGATGTATATAGTTTTGGAGTAGTTCTCATTGAACTATTGACAGGACAAAAAGCAGTTTCTTCAATCGGATCGGATGGATATGCGAAAAGTTTGGCTTCTTATTTCCGTACTTGCATGGATGACAATTGTTTATTTGATATACTTGATGAGAATGTGATGAAGGAGGGAGACAAAGAACATATCATGGTAATTGCCAAACTGGCCAATAGATGCTTAAATTTGAATGGTAAGGAACGACCTACAATGAGAGAAGTTACAATTGAGTTAGTAGGGATacaaaatttggaaaagaagGGTAATGATCATCATAATAGCCATGGAATTGATCTTTCCAAAACTAACACTCGTACTCCTCGGGACATACAACGTTGTTCCTCATTAAACCTCGAGTTAATTTCAAATAGCGAGACTTCTTCATCCTCAGATGTTCGCAACATGTTGCACCCAACGTATCCTTG 1247 0.3328 MCSLSYIFIGLGISLGSVSLLIVGWWLYKIIKKRREKKLKEKYFQQNGGLLLQQKLSSSPEFNVDIIKLFKLEDLEKATDHFNADRVLGKGGQGTVYKGMLADGKIVAVKKLKVHGNVEDFINEIVILAQINHRNVVKLLGCCLEAEFPLLVYEFIPNGTLFYHLHEENEELPMTWDMRLRIAVEVAGALFYLHSAASQPIYHRDIKSTNILLDEKYRAKVADFGASRLMSNIEVTHVTTRVHGTFGYLDPGYYYTGQLTEKSDVYSFGVVLIELLTGQKAVSSIGSDGYAKSLASYFRTCMDDNCLFDILDENVMKEGDKEHIMVIAKLANRCLNLNGKERPTMREVTIELVGIQNLEKKGNDHHNSHGIDLSKTNTRTPRDIQRCSSLNLELISNSETSSSSDVRNMLHPTYP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00416 415 CDD STKc_IRAK 88 348 - -
Bva01g00416 415 ProSiteProfiles Protein kinase domain profile. 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00416 415 SUPERFAMILY Protein kinase-like (PK-like) 63 352 IPR011009 -
Bva01g00416 415 Gene3D Transferase(Phosphotransferase) domain 1 156 379 - -
Bva01g00416 415 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 375 IPR045274 GO:0007166
Bva01g00416 415 PANTHER - 11 375 - -
Bva01g00416 415 SMART serkin_6 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00416 415 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Bva01g00416 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bva01g00416 415 Pfam Protein kinase domain 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00416 Bva-Chr1 3384700 3385947 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00416 9 356 Receptor kinase-like Gene Family AT1G69730 57.265 1.71e-135 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva01g00416 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00416 - - gmx:100799320 488.804