Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00408 ATGGCTCTTCCAAAAGTGAATGAAACGTTGCTAGAAAATCTTGAAGCAATGGGGTTTCCACGGGCACGAGCAATGAGAGCACTTTACTATTCTGGCAATACGACCTTAGAGGAAGCTATAAATTGGATAGTTGAACATGAGAATGACGCTGATATCGATGAGATGCCATCGGTAGATATAGATATCGAAATCGAGTCTTCAGATTCATTCCCAATATctgatgaaattaaaatgaaagcaCAGCTGTTAAGGGACCAAAACCGTAAAAGgaaagaggatgaagaaaaaaaattggagagagaaagagagaagGAGAGGATTCAGGCAGGTAAGAAGCTCTTGGAGGCAAAGCGAATCgctgaagaaaatgaaagaaaacgGAATTTGGCCCTCCGAAAAGCCgagaaagatgaagagaaaagagcaagagcaagagTTCTCCAGAAACTACAGCAGGATAAGCTAAGTAGAAGGTCTATGCTTGTGAATCCCCAAGAAAGCCATGCAGCTTTGAATTCTTCAGATATTCcaatacaaaaagaaaggAATCCAAAGCCAGTTTACAGGGTTGCAAAAACTGACCACTTGAGCGATTGTTTGAGATCTCTGAGGCGTAACCACAAGAGTGAAGATGCCAGAGTCAGAAGAGCCTTTCAAACACTTTCAATTTATGTTGGAAACGTTGTCAAGAATCCGAACGAGGAAAAGTACAGAAAGATTAGACTAAGCAACCCACTGTTCCAGGAAAGAGTTGGAAGTTTGCATGGAGGTATGGAGTTTCTTGAGCTCTGTGGGTTCGAAAGAATAGGCGAGTTCTTGCATCTTCCTGACGAAAAGATTGACATGGCAGTACTTAAATCAGCTAGGTCTGCATTAAACAATGCAATGACAAACCCCTTCTTTGGACTTTTAAGGACTTGGACATTGTA 929 0.3606 MALPKVNETLLENLEAMGFPRARAMRALYYSGNTTLEEAINWIVEHENDADIDEMPSVDIDIEIESSDSFPISDEIKMKAQLLRDQNRKRKEDEEKKLEREREKERIQAGKKLLEAKRIAEENERKRNLALRKAEKDEEKRARARVLQKLQQDKLSRRSMLVNPQESHAALNSSDIPIQKERNPKPVYRVAKTDHLSDCLRSLRRNHKSEDARVRRAFQTLSIYVGNVVKNPNEEKYRKIRLSNPLFQERVGSLHGGMEFLELCGFERIGEFLHLPDEKIDMAVLKSARSALNNAMTNPFFGLLRTWTL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00408 309 Coils Coil 119 140 - -
Bva01g00408 309 SMART PGNneu 216 277 - -
Bva01g00408 309 CDD UBA_PUB_plant 6 53 - -
Bva01g00408 309 Gene3D - 8 53 - -
Bva01g00408 309 Gene3D - 197 295 - -
Bva01g00408 309 SUPERFAMILY PUG domain-like 195 300 IPR036339 -
Bva01g00408 309 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 305 - -
Bva01g00408 309 MobiDBLite consensus disorder prediction 83 107 - -
Bva01g00408 309 SMART uba_6 7 45 IPR015940 -
Bva01g00408 309 Coils Coil 83 108 - -
Bva01g00408 309 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
Bva01g00408 309 Pfam PUB domain 213 281 IPR018997 -
Bva01g00408 309 Pfam UBA/TS-N domain 7 43 IPR015940 -
Bva01g00408 309 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Bva01g00408 309 PANTHER F13M7.16 PROTEIN 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00408 Bva-Chr1 3339613 3343644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00408 1 304 C2H2 Transcription Factor Family AT1G04850 56.818 1.27e-96 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00408 K24348 - gmx:100781260 423.705