Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00407 ATGGCTAGTATTGAACTAGTTGAGAAAGTTGTGATCACTCCTGAAAATCCCACACCAAAAAGGAGAATGTTCTTATCAAACATTGACTTGTCCCTTGTTGTTTACCTAGACACGGCTTCATTTTTTGATCCTCCAAGCACCGCAATGAGCTTCTCTGAGATCTGTGAGAAATTCTATTCTGCACTTAGTAAATTGTTTGTGCATTATGACTTCATGGCAGGCCGGCTCGCCCCGAGTTTGCAAGAGAATGATAGGTTTGAGATAGACTGTAATGGTGCTGGTGTTGTGGTTGCTGCAGCAAGAACTGGCCGTAGGTTGAGCgagtttggtttggtttctGCACCAAATCCAGAGTTGAGGGAATTGGTTGCTTTCTTgcatgaagatgatgaagaagaactTGACTTGAAAGACAAGCCCTTAGTATCCTTCCAGCTGACTCAATTTGGATGTGGAAGTTTAGCACTTGCTTCACACTACAACCACTGCACATTAGATGGAATAGCAATTAGAGACTTGGAGGCAAACATGGCTGCCTTAACTCGCGGAGACAGCCTCTTCATAGCACCTCATGCAGATAGAACAATGCTCAAAGCTAGAACCCCTCCCAAGATCAGTCATCCACACTTTGAGTACTCAAAATTCACTGATACAGACAAAACATTCACCGTTCGAGGTACAACTGCAGCAACCATCACCAAACAACCCATGTCAGATGATCAAACTTGCGTGCTTTGCTTATCGCCACAGCAAATTTTCAGCTTGAAAAAGTCAGCCATGAAGGACAGCAACTTAAAGAACTGCACCACATTTCAAGTTGTTGCAGCAAGAATATGGAAAGCTAGGAGCATTGCAACAAAGATGCCAGAAGAAAAAACATCCACAATGCTGTTTCCAGTTGATGCAAGGAAAAGGGTTGTTCCAGAAATTGCAGATGGCTTTGCAGGCAACGCGTTGGTCCCCGGATTTGCCCTGGCCACGGTGAAGGAGCTCATGGAATTGGAAGATGCTTGCCATATAAGAAAAGTGCAAGAAGGGATTGAAAGATTGGATGATGAGTATGTGAGGTCTGGAATAGATTGGTTGGAGGTGAATAGAGGGGTGCCTTGCAGGGAAGACTGTTTCTCCTTGGTGGCATGGTGGAGACTTGGGCTAGAGGAGCAAGTTTTTGCTTGGGGCAGATTGAAATGTGCCACTCCAATTGAACTTAAGCCTGGTCTGGTATTGCTTTTGCCAGGACCAGCTGGGGAGGGAGGCCTTAGCATATGCTTGGATTTACCTGAGGATCAAATGCAGAAGTTTTGCAGGATAATGCTGGAGGCATG 1325 0.4385 MASIELVEKVVITPENPTPKRRMFLSNIDLSLVVYLDTASFFDPPSTAMSFSEICEKFYSALSKLFVHYDFMAGRLAPSLQENDRFEIDCNGAGVVVAAARTGRRLSEFGLVSAPNPELRELVAFLHEDDEEELDLKDKPLVSFQLTQFGCGSLALASHYNHCTLDGIAIRDLEANMAALTRGDSLFIAPHADRTMLKARTPPKISHPHFEYSKFTDTDKTFTVRGTTAATITKQPMSDDQTCVLCLSPQQIFSLKKSAMKDSNLKNCTTFQVVAARIWKARSIATKMPEEKTSTMLFPVDARKRVVPEIADGFAGNALVPGFALATVKELMELEDACHIRKVQEGIERLDDEYVRSGIDWLEVNRGVPCREDCFSLVAWWRLGLEEQVFAWGRLKCATPIELKPGLVLLLPGPAGEGGLSICLDLPEDQMQKFCRIMLEA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00407 441 Gene3D - 1 214 IPR023213 -
Bva01g00407 441 Pfam Transferase family 3 434 - -
Bva01g00407 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 439 - -
Bva01g00407 441 Gene3D - 227 440 IPR023213 -
Bva01g00407 441 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00407 Bva-Chr1 3336891 3339136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00407 4 440 Monolignol Biosynthesis Gene Families AT5G48930 27.051 5.99e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00407 K15400 - gmx:100801822 639.032