Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00400 ATGAGGTTGGAGAAGTGCTGGTTCTGTTCTTCAACCATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGatttttagattttgtaGATCTAAATGCCACAAGAACTTTAAAATGAAGAGGAATCCTAGGAAAGTGAAGTGGACCAAGGCCTATCGGCGATTACATGGAAAGGATATGACACAGGATACTACTTTTGAGTTTGAGAGAAAGCGTAACAGGCCTGAAAGATATGATAGGAATGTTGTGGAGAATGTCCTCAAGGCCATGCCGAAGATTGTTAAAATTAGAACGGAGAGGGAAGAGAGACACCACAAAGAGAGGATGAAAGGCAAGAAAGGCAAGCTTGCAAAAGAGGCGAAACAGGAGTTGCAGCAGGGCATCCACTTGGTCAAAGCTCCCTCTGTGCTTCAAGAGGAGCCGTCACTCACTTTACCAAAGATCAAGGTCAAGGTTTTCCAACCGCAATCAGAAGAAAATCATGCCATGGAAGAGTG 506 0.4308 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDTTFEFERKRNRPERYDRNVVENVLKAMPKIVKIRTEREERHHKERMKGKKGKLAKEAKQELQQGIHLVKAPSVLQEEPSLTLPKIKVKVFQPQSEENHAMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00400 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 168 IPR000988 -
Bva01g00400 168 PANTHER BNAA04G10330D PROTEIN 1 168 - -
Bva01g00400 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Bva01g00400 168 SMART 4TRASH 6 44 IPR011017 -
Bva01g00400 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Bva01g00400 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Bva01g00400 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Bva01g00400 168 MobiDBLite consensus disorder prediction 104 124 - -
Bva01g00400 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00400 Bva-Chr1 3292510 3294753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00400 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.048 3.72e-81 235