Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00370 ATGGAAAGatacaaaattttgagagaGCTTGGAGATGGTTCTTGCGGTAATGTATACAAGGCCCGTGACATGACAACATATGAGATTGTTGCTgtcaaaaagttgaaaaagaagTTCTATTTCTGGGaagaatatacaaatttaagaGAAATCAAGACCCTCTGTAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTGTCAGAGAAAACAATGAACTGTTTTTAATTTTCGAATACATGGATTATAATCtgtatcaattaataaaagaaagagaaaggccCTTCTCAGAGGAAGAAATACGGTGCTTTATGACTCAAGTACTGCAAGGACTTAGTCATATGCACAAGAAAGGGTTCTTTCATCGGGACTTAAAACCTGaGAACTTGTTGGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGACTGGCAAGAGAAGTATCATCGATGCCTCCATATACTCAATATGTTTCCACTCGATGGTACCGAGCTCCAGAAGTTTTATTGCAGTCCCCATATTATACTCCGGCTGTTGATATGTGGGCAGTTGGTGCTATATTAGCTgagcttttttctttctcccccATTTTCCCTGGAGAAAGTGAACTAGATCAACTGTACAAAATATACTGTGTTCTTGGTAGACCAGATTTGACTGCTTTTGCTATAGGGGCAAACAACGCTAGGCTGTTTGACTTTGTTGGTCATGAAGTGGTTCCACCTATGAAGCTTTCTGATATCATTCAAAATGCCAGCTTGGAGGCAATAGATTTGATCACGCAACTTTTATCTTGGGACCCAACAAGAAGGCCGGATGCAGATCAGTCATTGCAACATCCTTTTTTCCATGTATGGGTTCCTCGTCCACTCCATGATCCACTCGAGCTGAGGCTAAGTAGCAAGAGGGCAAAGCCAAATCTTGAACTGAAACTGCAGGATTTTGGCCCTGATACCAATGACTGTTTTCTTGGCTTGACATTAGCTGTAAATCCCAGTGCTTCTAACTTGgATGTAGTCCATAATGTATCTAAGGGTATGGGAGAGGATTTACTATTTTGCTCGGATTTCAATCATCATCCAGATCAGTCAATTTTTGGGTCATTATTATCTCCTGATCAAAGTGGAATTCACACCCCAACAGAGACTTCACTGTCATTATCATTCGGTTCAATTCAACATCCACCCACGGGAGTTCCGCAGTCAGCAGGGTTCTCCTCCTTTCAGCCATTGCAGCCTAACATCTTAACTAGTCCATTTTTGGCATTGTCTTCTCCTTTCCAGCGCGGACACTGCCTGAGTGATTG 1310 0.3817 MERYKILRELGDGSCGNVYKARDMTTYEIVAVKKLKKKFYFWEEYTNLREIKTLCKMNHPNIIKLKEVVRENNELFLIFEYMDYNLYQLIKERERPFSEEEIRCFMTQVLQGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPYYTPAVDMWAVGAILAELFSFSPIFPGESELDQLYKIYCVLGRPDLTAFAIGANNARLFDFVGHEVVPPMKLSDIIQNASLEAIDLITQLLSWDPTRRPDADQSLQHPFFHVWVPRPLHDPLELRLSSKRAKPNLELKLQDFGPDTNDCFLGLTLAVNPSASNLDVVHNVSKGMGEDLLFCSDFNHHPDQSIFGSLLSPDQSGIHTPTETSLSLSFGSIQHPPTGVPQSAGFSSFQPLQPNILTSPFLALSSPFQRGHCLSD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00370 436 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00370 436 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Bva01g00370 436 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00370 436 CDD STKc_MAK_like 4 284 - -
Bva01g00370 436 Gene3D Transferase(Phosphotransferase) domain 1 83 290 - -
Bva01g00370 436 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 324 - -
Bva01g00370 436 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Bva01g00370 436 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00370 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bva01g00370 436 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00370 Bva-Chr1 3141764 3149329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00370 7 294 MAP Kinase Gene Family AT4G01370 39.527 1.11e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Bva01g00370 Pkinase 1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00370 K08829 K08830 gmx:100792842 744.962