Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00365 ATGATAACAATTGTTCTTCCTAATCAAGTTATCTCCTTACCTGCTGCCTCTGTTACTAAATGTGCAATAAATCCCAAGTGCTGCAACAGGTTCTTTGAAGTATATAGAAGTTCAATTAGAGaatattttggtctatctgTTGCTGGGGACCGTTATAGGTTCAGGACTACTGGTGTAGTCAAATGGAGCCGAGGAGTATCTAATTTGCAGACCCCACAAGGGACTTGGGAAGAACCTGATGATGGTAGTGGTAGTGAGgatgatgatgaggatgaagacgaggaagaggaagaggaaaattATGGCTTTGAAAGTGATTGGGAAGAGGAGGAGACAAATACTTCAGCTGTTAAAAGGGTTTATAAATCTTCAGGAAACACGTATGAGGAGGATACTTTGAGGGAGGTTGAACGGCTTTTGGAACCAGAAGAAAGAGCCATCTTGCAGCAGAATGTGACTCCTAACTTGGAAAAAATATCCACGGCGAAATGGAGCCCACTGCACACTCTATCCTTATCAGGGCAGATAAGTTGCATGGACAAGCTACTTGAGGATGGatttgatattgattttcttaataatGAAGGTCTCACTGCTCTTCAAAAGGCAAttataggaaaaaaagaagctgtTATAAGCCATCTTCTACGAAAAGGTGCAAGTCCTCATGTCAAAGATAAGGATGGTGCTGCCCCACTTCATTATGCAGTTCAAGTTGGTGCCAAGCAAACGGTGAAGTTATTGATCAAATATAAGGTTGATGTCAACGCTGCAGATAATGAAGGTTGGACTCCATTGCACGTTGCCATTCAAAGCAGAAATAGAGACATAGCAAAAATTTTGCTGGTAAATGGTGCAGATAAGACAAGGAAAACTAAGGATGGAAAAACTGCATTGGATTTGAGTTTATGTTATGGGAAAGACTTTAAGTCATATGACCTTGCCAAATTACTAAAGGTGGTTCCAGCTAACAGAGATCTTTG 983 0.3723 MITIVLPNQVISLPAASVTKCAINPKCCNRFFEVYRSSIREYFGLSVAGDRYRFRTTGVVKWSRGVSNLQTPQGTWEEPDDGSGSEDDDEDEDEEEEEENYGFESDWEEEETNTSAVKRVYKSSGNTYEEDTLREVERLLEPEERAILQQNVTPNLEKISTAKWSPLHTLSLSGQISCMDKLLEDGFDIDFLNNEGLTALQKAIIGKKEAVISHLLRKGASPHVKDKDGAAPLHYAVQVGAKQTVKLLIKYKVDVNAADNEGWTPLHVAIQSRNRDIAKILLVNGADKTRKTKDGKTALDLSLCYGKDFKSYDLAKLLKVVPANRDL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00365 327 SMART ANK_2a 195 224 IPR002110 GO:0005515
Bva01g00365 327 SMART ANK_2a 294 327 IPR002110 GO:0005515
Bva01g00365 327 SMART ANK_2a 261 290 IPR002110 GO:0005515
Bva01g00365 327 SMART ANK_2a 228 257 IPR002110 GO:0005515
Bva01g00365 327 SMART ANK_2a 162 191 IPR002110 GO:0005515
Bva01g00365 327 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Bva01g00365 327 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Bva01g00365 327 MobiDBLite consensus disorder prediction 69 120 - -
Bva01g00365 327 ProSiteProfiles Ankyrin repeat region circular profile. 228 260 - -
Bva01g00365 327 Gene3D - 232 324 IPR036770 -
Bva01g00365 327 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 94 319 - -
Bva01g00365 327 Gene3D - 124 231 IPR036770 -
Bva01g00365 327 SUPERFAMILY Ankyrin repeat 164 307 IPR036770 -
Bva01g00365 327 PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 94 319 - -
Bva01g00365 327 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Bva01g00365 327 ProSiteProfiles Ankyrin repeat profile. 228 260 IPR002110 GO:0005515
Bva01g00365 327 MobiDBLite consensus disorder prediction 80 110 - -
Bva01g00365 327 Pfam Ankyrin repeats (3 copies) 210 291 IPR002110 GO:0005515
Bva01g00365 327 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00365 147 287 Ion Channels AT2G25600 31.206 6.35e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00365 - - lja:Lj0g3v0067589.2 410.223