Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00363 ATGGATGAGGATTTCGATATGCCGCCGGTGGAAGGGATGAACGAGGACTTCGATCTTCCCGACGACGCCCCCACCCTCAAGGTTGGGGAGGAGAAGGAGATCGGGAAGCAGGGCTTGAAGAAGAAGCTCGTCAAGGAAGGTGAAGGCTGGGATACCCCTGAAGTGGGTGATGAAGTTGAAGTTCATTACACTGGGACTTTACTTGATGGGACTAAGTTCGATTCAAGCCGAGACGGGGGAACTCCCTTCAAGTTTACTCTTGGACAAGGTAAAGTAATCAAAGGATGGGATCAAGGTATTATAACCATGAAGAAAGGTGAGAACGCTGTTTTTACCATCCCTCCTGAACTGGCTTATGGTGAATCTGGTTCCCCTCCAACTATTCCTCCCAATGCTACTCTTCAATTTGATGTTGAGCTGCTGTCCTGGGCTAGTGTGAAGGACATTTGTAAGGATGGTGGTGTATTTAAGAAGGTGCTCACTGCGGGTGAGAAGTGGGAGAATCCAAAGGATCCTGATGAAGTATTAGTAAAGTATGAAGCTCGGCTTGAAGATGGAACACTTGTAGCCAAATCTGATGGAGTGGAGTTCACAGTTGAAGAGGGTCATTTTTGTCCTGCCTTGTCAAAGGCCGTGAAGACCATGAAGAAGGGAGAGAAAGTGCTTTTGACGGTGAAGCCACAATATGGATTTGGTGAGAAGGGAAAGCCGCAACAGGGTGAAGAAGGTGCAGTCCCACCAAATGCAACATTGCAGATTACTTTAGAGTTAGTATCATGGAAGACTGTGTCAGAAGTAACCAACGACAAGAAGGTTATGAAAAAGATACTCAAAGAAGGGGAAGGATATGAGCGTCCAAATGAGGGGGCCGTTGTTAAATTGAAAGTGATTGGTAAACTGCAAGATGGTACTATCTTCTTGAAAAAGGGATatggtgaagaagaagatcTCTTTGAGTTCAAAACAGATGAAGAACAAGTCATTGATGGACTTGATAGAGGTGTTATGACTATGAAGAAGGGTGAAGTAGCTTTGTTGACTATTTCCCCCGAGTATGCTTATGGTTCATCCCAGTTCCAACAAGAGTTGGCTGTTGTTCCGCCTAACTCTACTGTGTATTATGAGGTTGAGTTGGTATCATTAGAGAAGGAGAAGGAGTCTTGGGATATGAACACTGAGGAGAAGATTGAAGCTGCAggtaagaaaaaggaagaagggaATGTCTTATTTAAGGCTGGTAAATATGCTAGAGCTTCTAAAAGATATGAGAAGGCTGTGAAGTTCATCGAGTACGATTCTGCCTTCAGCGAAGAGCAGAAAAAGCAGGCTAAGGCATTGAAGGTTGCCTGCAACCTTAACAATGCAGCCTGCCAgttgaaattaaaagattttaaacaGGCAGAGAAATTGTGCACTAAGGTGCTGGACCTTGAGAGTAGAAACGTTAAGGCCCTCTATAGAAGGGCCCAGGCTTATATCCATCTGGCAGACTTGGATTTGGCTGAATTTGACATCAAGAAAGCTCTCGAGATTGACCCTGACAACAGGGAGGTGAAGCTGGAATACAGaactttgaaagaaaagatgaaggaGTACAACAGAAGGGAGGCGAAACTCTACGGAAACATGTTTGCCAAGATGAGTAAATCGGAGCCTCTTGATAAACCAGCGAAGGAGGATGCTGAACCAATGAGCATTGACGAGAAAGCATA 1712 0.4305 MDEDFDMPPVEGMNEDFDLPDDAPTLKVGEEKEIGKQGLKKKLVKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDGGTPFKFTLGQGKVIKGWDQGIITMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWASVKDICKDGGVFKKVLTAGEKWENPKDPDEVLVKYEARLEDGTLVAKSDGVEFTVEEGHFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKPQQGEEGAVPPNATLQITLELVSWKTVSEVTNDKKVMKKILKEGEGYERPNEGAVVKLKVIGKLQDGTIFLKKGYGEEEDLFEFKTDEEQVIDGLDRGVMTMKKGEVALLTISPEYAYGSSQFQQELAVVPPNSTVYYEVELVSLEKEKESWDMNTEEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAVKFIEYDSAFSEEQKKQAKALKVACNLNNAACQLKLKDFKQAEKLCTKVLDLESRNVKALYRRAQAYIHLADLDLAEFDIKKALEIDPDNREVKLEYRTLKEKMKEYNRREAKLYGNMFAKMSKSEPLDKPAKEDAEPMSIDEKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00363 570 Coils Coil 515 542 - -
Bva01g00363 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 270 380 - -
Bva01g00363 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 382 551 - -
Bva01g00363 570 Gene3D Tetratricopeptide repeat domain 389 542 IPR011990 GO:0005515
Bva01g00363 570 Gene3D - 262 388 IPR046357 GO:0003755
Bva01g00363 570 PANTHER PEPTIDYLPROLYL ISOMERASE 1 268 - -
Bva01g00363 570 SMART tpr_5 448 481 IPR019734 GO:0005515
Bva01g00363 570 SMART tpr_5 482 515 IPR019734 GO:0005515
Bva01g00363 570 SMART tpr_5 399 432 IPR019734 GO:0005515
Bva01g00363 570 MobiDBLite consensus disorder prediction 1 18 - -
Bva01g00363 570 SUPERFAMILY TPR-like 387 547 IPR011990 GO:0005515
Bva01g00363 570 MobiDBLite consensus disorder prediction 549 570 - -
Bva01g00363 570 Pfam Tetratricopeptide repeat 482 515 IPR001440 GO:0005515
Bva01g00363 570 SUPERFAMILY FKBP-like 264 399 - -
Bva01g00363 570 MobiDBLite consensus disorder prediction 1 32 - -
Bva01g00363 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Bva01g00363 570 Gene3D - 147 261 IPR046357 GO:0003755
Bva01g00363 570 Gene3D - 29 146 IPR046357 GO:0003755
Bva01g00363 570 PANTHER PEPTIDYLPROLYL ISOMERASE 382 551 - -
Bva01g00363 570 SUPERFAMILY FKBP-like 149 263 - -
Bva01g00363 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 268 - -
Bva01g00363 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Bva01g00363 570 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515
Bva01g00363 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755
Bva01g00363 570 MobiDBLite consensus disorder prediction 551 570 - -
Bva01g00363 570 SUPERFAMILY FKBP-like 34 148 - -
Bva01g00363 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Bva01g00363 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 258 IPR001179 GO:0003755
Bva01g00363 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755
Bva01g00363 570 PANTHER PEPTIDYLPROLYL ISOMERASE 270 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00363 Bva-Chr1 3111260 3115349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00363 1 547 Calmodulin-binding Proteins AT3G25230 81.603 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00363 K09571 - vvi:100266654 954.125